CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh1_pm.sca_1_chr1_3_0000032
(
Nectria haematococca
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
fgenesh1_pm.sca_1_chr1_3_0000032
T390332_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh1_pm.sca_1_chr1_3_0000032
Zinc cluster
32
74
LSCYPCRTRKLKCDRNHPCSNCTKREGMGTTSCSYATPVTRKK
Links
Other
Zinc cluster
family TFs
Other
Nectria haematococca
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
NechaG89899
Fusarium solani
NechaG89899
N
0.683
ACRE_065800
Acremonium chrysogenum
ACRE_065800
N
0.595
MAC_07154
Metarhizium acridum
MAC_07154
N
0.595
X797_005779
Metarhizium robertsii
X797_005779
N
0.595
NCU09804
Neurospora crassa
NCU09804
N
0.579
VHEMI08921
Torrubiella hemipterigena
VHEMI08921
N
0.564
W97_01247
Coniosporium apollinis
W97_01247
N
0.554
Bcin15g02520
Botrytis cinerea
Bcin15g02520
N
0.548
VDBG_04863
Verticillium albo atrum
VDBG_04863
N
0.541
VDBG_04863
Verticillium alfalfae
VDBG_04863
N
0.541
A1O1_05413
Capronia coronata
A1O1_05413
N
0.539
A1O3_09265
Capronia epimyces
A1O3_09265
N
0.539
BBA_02662
Beauveria bassiana
BBA_02662
I
0.539