CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSOARG00000005838
(
Ovis aries
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
ENSOARG00000005838
T328573_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Hmg20b
M02487_2.00
Mus musculus
NNATTATWHWN
NWDWATAATNN
PBM
Weirauch et al.(2014)
pTH8555
0.605
0.609
For this family, TFs with SR scores >
0.415
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOARP00000006260
Sox
84
152
PRAPTTGYAIFLNEQRSQLRAQHPNLPFPEITKMLAAQWAQLPQEKKQRYVCEADEDKQRYIRELKAYQ
Links
Other
Sox
family TFs
Other
Ovis aries
TFs
168 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F775_32546
Aegilops tauschii
F775_32546
N
Aquca_108_00051
Aquilegia coerulea
Aquca_108_00051
N
Bo1g147290
Brassica oleracea
Bo1g147290
N
Bra040015
Brassica rapa
Bra040015
N
PK16646.1
Cannabis sativa
PK16646.1
N
evm.TU.supercontig_9.326
Carica papaya
evm.TU.supercontig_9.326
N
Cla012999
Citrullus lanatus
Cla012999
N
Ciclev10021850m.g
Citrus clementina
Ciclev10021850m.g
N
orange1.1g025458m.g
Citrus sinensis
orange1.1g025458m.g
N
orange1.1g024388m.g
Citrus sinensis
orange1.1g024388m.g
N
Eucgr.G02017
Eucalyptus grandis
Eucgr.G02017
N
Thhalv10001777m.g
Eutrema salsugineum
Thhalv10001777m.g
N
gene17671-v1.0-hybrid
Fragaria vesca
gene17671-v1.0-hybrid
N
GLYMA11G13420
Glycine max
GLYMA11G13420
N
GLYMA12G05410
Glycine max
GLYMA12G05410
N
Gorai.N001000
Gossypium raimondii
Gorai.N001000
N
Gorai.011G138900
Gossypium raimondii
Gorai.011G138900
N
Gorai.007G162200
Gossypium raimondii
Gorai.007G162200
N
Lus10025581.g
Linum usitatissimum
Lus10025581.g
N
Lus10025582.g
Linum usitatissimum
Lus10025582.g
N
Lus10027045.g
Linum usitatissimum
Lus10027045.g
N
MDP0000184998
Malus domestica
MDP0000184998
N
MDP0000716430
Malus domestica
MDP0000716430
N
MTR_2g099155
Medicago truncatula
MTR_2g099155
N
mgf000871m
Mimulus guttatus
mgf000871m
N
GSMUA_Achr3G19260_001
Musa acuminata
GSMUA_Achr3G19260_001
N
GSMUA_Achr6G28720_001
Musa acuminata
GSMUA_Achr6G28720_001
N
GSMUA_Achr9G08210_001
Musa acuminata
GSMUA_Achr9G08210_001
N
Pavir.Ga01503
Panicum virgatum
Pavir.Ga01503
N
POPTR_0014s17210
Populus trichocarpa
POPTR_0014s17210
N
POPTR_0017s05170
Populus trichocarpa
POPTR_0017s05170
N
Pm007242
Prunus mume
Pm007242
N
PRUPE_ppa010592mg
Prunus persica
PRUPE_ppa010592mg
N
30001.m000076
Ricinus communis
30001.m000076
N
SapurV1A.1186s0090
Salix purpurea
SapurV1A.1186s0090
N
SapurV1A.0947s0070
Salix purpurea
SapurV1A.0947s0070
N
Si010917m.g
Setaria italica
Si010917m.g
N
Solyc08g013980.2
Solanum lycopersicum
Solyc08g013980.2
N
PGSC0003DMG400020996
Solanum tuberosum
PGSC0003DMG400020996
N
Sb06g021360
Sorghum bicolor
Sb06g021360
N
TCM_002550
Theobroma cacao
TCM_002550
N
TCM_019960
Theobroma cacao
TCM_019960
N
TCM_019968
Theobroma cacao
TCM_019968
N
Traes_2AL_6990211D0
Triticum aestivum
Traes_2AL_6990211D0
N
Traes_2BL_7B5109B55
Triticum aestivum
Traes_2BL_7B5109B55
N
Traes_2DL_B72450387
Triticum aestivum
Traes_2DL_B72450387
N
VIT_00s0226g00140
Vitis vinifera
VIT_00s0226g00140
N
GRMZM2G053557
Zea mays
GRMZM2G053557
N