HBP1 (Procavia capensis)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 ENSPCAG00000014060 T328852_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Hbp1
M00194_2.00 		Mus musculus
NNNDDNNN
NNNHHNNN		 PBM
Badis et al.(2009)
Hbp1_2241 		0.741 1.000
HBP1
M11299_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HBP1_Q2 		0.741 1.000
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPCAP00000013139 Sox 430 497

Links

Other Sox family TFs
Other Procavia capensis TFs

111 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_05292 Aegilops tauschii F775_05292 I
F775_14143 Aegilops tauschii F775_14143 I
F775_31062 Aegilops tauschii F775_31062 I
F775_31450 Aegilops tauschii F775_31450 I
AMTR_s00085p00165180 Amborella trichopoda AMTR_s00085p00165180 I
AMTR_s00123p00122830 Amborella trichopoda AMTR_s00123p00122830 I
Aquca_002_00078 Aquilegia coerulea Aquca_002_00078 I
Aquca_012_00046 Aquilegia coerulea Aquca_012_00046 I
Aquca_032_00056 Aquilegia coerulea Aquca_032_00056 I
Aquca_133_00021 Aquilegia coerulea Aquca_133_00021 I
STM Arabidopsis lyrata fgenesh1_pg.C_scaffold_2000245 I
KNAT6 Arabidopsis lyrata fgenesh2_kg.1__2553__AT1G23380.2 I
KNAT2 Arabidopsis lyrata fgenesh2_kg.2__1305__AT1G70510.1 I
KNAT1 Arabidopsis lyrata fgenesh2_kg.6__2861__AT4G08150.1 I
KNAT6 Arabidopsis thaliana AT1G23380 D
STM Arabidopsis thaliana AT1G62360 I
KNAT2 Arabidopsis thaliana AT1G70510 I
KNAT1 Arabidopsis thaliana AT4G08150 I
Bostr.12659s0199 Boechera stricta Bostr.12659s0199 I
Bostr.22157s0102 Boechera stricta Bostr.22157s0102 I
Bostr.3877s0047 Boechera stricta Bostr.3877s0047 I
BRADI1G07247 Brachypodium distachyon BRADI1G07247 I
BRADI1G12677 Brachypodium distachyon BRADI1G12677 I
BRADI1G57607 Brachypodium distachyon BRADI1G57607 I
BRADI2G11540 Brachypodium distachyon BRADI2G11540 I
BRADI2G38390 Brachypodium distachyon BRADI2G38390 I
Bo2g068250 Brassica oleracea Bo2g068250 I
Bo3g043050 Brassica oleracea Bo3g043050 I
Bo5g039530 Brassica oleracea Bo5g039530 I
Bo8g073790 Brassica oleracea Bo8g073790 I
Bo9g037420 Brassica oleracea Bo9g037420 I
Bra000638 Brassica rapa Bra000638 I
Bra007920 Brassica rapa Bra007920 I
Bra016348 Brassica rapa Bra016348 I
Bra024591 Brassica rapa Bra024591 I
Bra027050 Brassica rapa Bra027050 I
PK12151.1 Cannabis sativa PK12151.1 I
PK16587.1 Cannabis sativa PK16587.1 I
PK25034.1 Cannabis sativa PK25034.1 D
PK26828.1 Cannabis sativa PK26828.1 I
Cagra.0077s0011 Capsella grandiflora Cagra.0077s0011 I
Cagra.0605s0071 Capsella grandiflora Cagra.0605s0071 I
Cagra.1777s0019 Capsella grandiflora Cagra.1777s0019 I
Cagra.7524s0001 Capsella grandiflora Cagra.7524s0001 I
Carubv10002748m.g Capsella rubella Carubv10002748m.g I
Carubv10011119m.g Capsella rubella Carubv10011119m.g I
Carubv10022064m.g Capsella rubella Carubv10022064m.g I
Carubv10022235m.g Capsella rubella Carubv10022235m.g I
evm.TU.supercontig_152.56 Carica papaya evm.TU.supercontig_152.56 I
evm.TU.supercontig_48.162 Carica papaya evm.TU.supercontig_48.162 I
evm.TU.supercontig_69.81 Carica papaya evm.TU.supercontig_69.81 I
Ca_00668 Cicer arietinum Ca_00668 I
Ca_03625 Cicer arietinum Ca_03625 I
Ca_09202 Cicer arietinum Ca_09202 I
Ca_18152 Cicer arietinum Ca_18152 I
Cla010234 Citrullus lanatus Cla010234 I
Cla014651 Citrullus lanatus Cla014651 I
Cla019493 Citrullus lanatus Cla019493 I
Cla020277 Citrullus lanatus Cla020277 I
Cla021211 Citrullus lanatus Cla021211 I
Cla023003 Citrullus lanatus Cla023003 I
Ciclev10001508m.g Citrus clementina Ciclev10001508m.g I
Ciclev10001779m.g Citrus clementina Ciclev10001779m.g I
Ciclev10015581m.g Citrus clementina Ciclev10015581m.g I
Ciclev10015818m.g Citrus clementina Ciclev10015818m.g I
Ciclev10022781m.g Citrus clementina Ciclev10022781m.g I
Ciclev10033524m.g Citrus clementina Ciclev10033524m.g I
orange1.1g024428m.g Citrus sinensis orange1.1g024428m.g I
orange1.1g029411m.g Citrus sinensis orange1.1g029411m.g I
orange1.1g038569m.g Citrus sinensis orange1.1g038569m.g I
orange1.1g045160m.g Citrus sinensis orange1.1g045160m.g I
Cucsa.044950 Cucumis sativus Cucsa.044950 I
Cucsa.090630 Cucumis sativus Cucsa.090630 I
Cucsa.353140 Cucumis sativus Cucsa.353140 I
Cucsa.395320 Cucumis sativus Cucsa.395320 I
Eucgr.D01364 Eucalyptus grandis Eucgr.D01364 I
Eucgr.F00106 Eucalyptus grandis Eucgr.F00106 I
Eucgr.H02544 Eucalyptus grandis Eucgr.H02544 I
Thhalv10009009m.g Eutrema salsugineum Thhalv10009009m.g I
Thhalv10019501m.g Eutrema salsugineum Thhalv10019501m.g I
Thhalv10023520m.g Eutrema salsugineum Thhalv10023520m.g I
Thhalv10028724m.g Eutrema salsugineum Thhalv10028724m.g I
gene03606-v1.0-hybrid Fragaria vesca gene03606-v1.0-hybrid I
gene19507-v1.0-hybrid Fragaria vesca gene19507-v1.0-hybrid I
gene32207-v1.0-hybrid Fragaria vesca gene32207-v1.0-hybrid I
GLYMA0041S00360 Glycine max GLYMA0041S00360 I
GLYMA01G03450 Glycine max GLYMA01G03450 I
GLYMA02G04190 Glycine max GLYMA02G04190 I
GLYMA04G35850 Glycine max GLYMA04G35850 I
GLYMA07G39350 Glycine max GLYMA07G39350 I
GLYMA08G39170 Glycine max GLYMA08G39170 I
GLYMA09G01000 Glycine max GLYMA09G01000 I
GLYMA10G28820 Glycine max GLYMA10G28820 I
GLYMA14G10430 Glycine max GLYMA14G10430 I
GLYMA15G11850 Glycine max GLYMA15G11850 I
GLYMA17G01370 Glycine max GLYMA17G01370 I
GLYMA18G20293 Glycine max GLYMA18G20293 I
GLYMA19G41610 Glycine max GLYMA19G41610 I
GLYMA20G22986 Glycine max GLYMA20G22986 I
Gorai.005G098100 Gossypium raimondii Gorai.005G098100 I
Gorai.005G180500 Gossypium raimondii Gorai.005G180500 I
Gorai.009G181500 Gossypium raimondii Gorai.009G181500 I
Gorai.009G223200 Gossypium raimondii Gorai.009G223200 I
Gorai.009G336900 Gossypium raimondii Gorai.009G336900 I
Gorai.010G029000 Gossypium raimondii Gorai.010G029000 I
Gorai.010G183800 Gossypium raimondii Gorai.010G183800 I
Gorai.011G011700 Gossypium raimondii Gorai.011G011700 I
KNOX3_HORVU Hordeum vulgare KNOX3_HORVU D
MLOC_11678 Hordeum vulgare MLOC_11678 I
MLOC_57232 Hordeum vulgare MLOC_57232 I
LPERR01G11670 Leersia perrieri LPERR01G11670 I
LPERR03G27340 Leersia perrieri LPERR03G27340 I
LPERR03G29990 Leersia perrieri LPERR03G29990 I
LPERR05G01890 Leersia perrieri LPERR05G01890 I
LPERR07G01870 Leersia perrieri LPERR07G01870 I
Lus10007245.g Linum usitatissimum Lus10007245.g I
Lus10028244.g Linum usitatissimum Lus10028244.g I
Lus10029125.g Linum usitatissimum Lus10029125.g I
Lus10030003.g Linum usitatissimum Lus10030003.g I
chr4.CM0288.890.nd Lotus japonicus chr4.CM0288.890.nd I
LjSGA_010170.1 Lotus japonicus LjSGA_010170.1 I
LjSGA_022785.1 Lotus japonicus LjSGA_022785.1 I
LjT03D14.220.nd Lotus japonicus LjT03D14.220.nd I
MDP0000136226 Malus domestica MDP0000136226 I
MDP0000231216 Malus domestica MDP0000231216 I
MDP0000252095 Malus domestica MDP0000252095 I
MDP0000254187 Malus domestica MDP0000254187 I
MDP0000254847 Malus domestica MDP0000254847 I
MDP0000280307 Malus domestica MDP0000280307 I
MDP0000294096 Malus domestica MDP0000294096 I
cassava17642.valid.m1 Manihot esculenta cassava17642.valid.m1 I
cassava19841.m1 Manihot esculenta cassava19841.m1 I
cassava22394.valid.m1 Manihot esculenta cassava22394.valid.m1 I
cassava23924.valid.m1 Manihot esculenta cassava23924.valid.m1 I
cassava27839.m1 Manihot esculenta cassava27839.m1 I
cassava35932.valid.m1 Manihot esculenta cassava35932.valid.m1 I
cassava7893.valid.m1 Manihot esculenta cassava7893.valid.m1 I
MTR_1g017080 Medicago truncatula MTR_1g017080 I
MTR_1g084060 Medicago truncatula MTR_1g084060 I
MTR_2g024390 Medicago truncatula MTR_2g024390 I
MTR_5g033720 Medicago truncatula MTR_5g033720 I
est_orfs.8_8268_4271518:3 Micromonas pusilla est_orfs.8_8268_4271518:3 I
EuGene.1100010071 Micromonas sp RCC299 EuGene.1100010071 I
mgf000149m Mimulus guttatus mgf000149m I
mgf016504m Mimulus guttatus mgf016504m I
mgf017032m Mimulus guttatus mgf017032m I
mgf024741m Mimulus guttatus mgf024741m I
GSMUA_Achr10G28700_001 Musa acuminata GSMUA_Achr10G28700_001 I
GSMUA_Achr2G13200_001 Musa acuminata GSMUA_Achr2G13200_001 I
GSMUA_Achr3G26230_001 Musa acuminata GSMUA_Achr3G26230_001 I
GSMUA_Achr4G03120_001 Musa acuminata GSMUA_Achr4G03120_001 I
GSMUA_Achr4G14600_001 Musa acuminata GSMUA_Achr4G14600_001 I
GSMUA_Achr4G28270_001 Musa acuminata GSMUA_Achr4G28270_001 I
GSMUA_Achr5G01960_001 Musa acuminata GSMUA_Achr5G01960_001 I
GSMUA_Achr6G04640_001 Musa acuminata GSMUA_Achr6G04640_001 I
GSMUA_Achr7G08050_001 Musa acuminata GSMUA_Achr7G08050_001 I
GSMUA_Achr7G27540_001 Musa acuminata GSMUA_Achr7G27540_001 I
OBART01G11630 Oryza barthii OBART01G11630 I
OBART03G32690 Oryza barthii OBART03G32690 I
OBART03G32710 Oryza barthii OBART03G32710 I
OBART05G02090 Oryza barthii OBART05G02090 I
OBART07G01880 Oryza barthii OBART07G01880 I
OB01G22470 Oryza brachyantha OB01G22470 I
OB03G39780 Oryza brachyantha OB03G39780 I
OB07G11590 Oryza brachyantha OB07G11590 I
ORGLA01G0097800 Oryza glaberrima ORGLA01G0097800 I
ORGLA03G0270100 Oryza glaberrima ORGLA03G0270100 I
ORGLA03G0296100 Oryza glaberrima ORGLA03G0296100 I
ORGLA03G0296300 Oryza glaberrima ORGLA03G0296300 I
ORGLA05G0020500 Oryza glaberrima ORGLA05G0020500 I
ORGLA07G0017300 Oryza glaberrima ORGLA07G0017300 I
OGLUM01G14210 Oryza glumaepatula OGLUM01G14210 I
OGLUM03G32330 Oryza glumaepatula OGLUM03G32330 I
OGLUM03G32350 Oryza glumaepatula OGLUM03G32350 I
OGLUM05G02160 Oryza glumaepatula OGLUM05G02160 I
OGLUM07G01740 Oryza glumaepatula OGLUM07G01740 I
BGIOSGA003338 Oryza indica BGIOSGA003338 I
BGIOSGA009878 Oryza indica BGIOSGA009878 I
BGIOSGA013637 Oryza indica BGIOSGA013637 I
OSH71 Oryza indica BGIOSGA018883 I
OSH15 Oryza indica BGIOSGA025091 I
OLONG_001151 Oryza longistaminata OLONG_001151 I
OLONG_001153 Oryza longistaminata OLONG_001153 I
OLONG_012157 Oryza longistaminata OLONG_012157 I
OMERI03G29420 Oryza meridionalis OMERI03G29420 I
OMERI03G29440 Oryza meridionalis OMERI03G29440 I
OMERI05G02200 Oryza meridionalis OMERI05G02200 I
OMERI07G01180 Oryza meridionalis OMERI07G01180 I
ONIVA03G34200 Oryza nivara ONIVA03G34200 I
ONIVA03G34220 Oryza nivara ONIVA03G34220 I
ONIVA03G37180 Oryza nivara ONIVA03G37180 I
ONIVA05G02030 Oryza nivara ONIVA05G02030 I
ONIVA07G00730 Oryza nivara ONIVA07G00730 I
OPUNC01G12460 Oryza punctata OPUNC01G12460 I
OPUNC03G29850 Oryza punctata OPUNC03G29850 I
OPUNC03G29870 Oryza punctata OPUNC03G29870 I
OPUNC05G01700 Oryza punctata OPUNC05G01700 I
OPUNC07G02410 Oryza punctata OPUNC07G02410 I
ORUFI01G13730 Oryza rufipogon ORUFI01G13730 I
ORUFI03G34060 Oryza rufipogon ORUFI03G34060 I
ORUFI03G34080 Oryza rufipogon ORUFI03G34080 I
ORUFI05G02190 Oryza rufipogon ORUFI05G02190 I
ORUFI07G01770 Oryza rufipogon ORUFI07G01770 I
OSH6 Oryza sativa OS01G0302500 I
OS03G0673000 Oryza sativa OS03G0673000 I
OS03G0727200 Oryza sativa OS03G0727200 I
OSH71 Oryza sativa OS05G0129700 I
OSH15 Oryza sativa OS07G0129700 I
OSTLU_5313 Ostreococcus lucimarinus OSTLU_5313 I
fgenesh1_pm.chr_4_#_82 Ostreococcus RCC809 fgenesh1_pm.chr_4_#_82 I
fgenesh1_pg.C_Chr_04.0001000291 Ostreococcus tauri fgenesh1_pg.C_Chr_04.0001000291 I
Pavir.Ba03909 Panicum virgatum Pavir.Ba03909 I
Pavir.Bb00225 Panicum virgatum Pavir.Bb00225 I
Pavir.Ca00748 Panicum virgatum Pavir.Ca00748 I
Pavir.Ea00998 Panicum virgatum Pavir.Ea00998 I
Pavir.Eb01302 Panicum virgatum Pavir.Eb01302 I
Pavir.Ia00428 Panicum virgatum Pavir.Ia00428 I
Pavir.Ia00731 Panicum virgatum Pavir.Ia00731 I
Pavir.Ia00733 Panicum virgatum Pavir.Ia00733 I
Pavir.J00864 Panicum virgatum Pavir.J00864 I
Pavir.J02025 Panicum virgatum Pavir.J02025 I
Pavir.J02443 Panicum virgatum Pavir.J02443 I
Pavir.J06042 Panicum virgatum Pavir.J06042 I
Pavir.J30099 Panicum virgatum Pavir.J30099 I
PDK_20s1308201g001 Phoenix dactylifera PDK_20s1308201g001 I
PDK_20s1334792g001 Phoenix dactylifera PDK_20s1334792g001 I
PDK_20s1688611g001 Phoenix dactylifera PDK_20s1688611g001 I
e_gw1.235.24.1 Physcomitrella patens e_gw1.235.24.1 I
POPTR_0002s11400 Populus trichocarpa POPTR_0002s11400 I
POPTR_0004s00650 Populus trichocarpa POPTR_0004s00650 I
POPTR_0008s19290 Populus trichocarpa POPTR_0008s19290 I
POPTR_0010s05340 Populus trichocarpa POPTR_0010s05340 I
POPTR_0011s01590 Populus trichocarpa POPTR_0011s01590 I
POPTR_0012s08900 Populus trichocarpa POPTR_0012s08900 I
POPTR_0015s09040 Populus trichocarpa POPTR_0015s09040 I
Pm006717 Prunus mume Pm006717 I
Pm006718 Prunus mume Pm006718 I
Pm009705 Prunus mume Pm009705 I
Pm028537 Prunus mume Pm028537 I
PRUPE_ppa008461mg Prunus persica PRUPE_ppa008461mg I
PRUPE_ppa013871mg Prunus persica PRUPE_ppa013871mg I
PRUPE_ppa019852mg Prunus persica PRUPE_ppa019852mg I
29631.m001056 Ricinus communis 29631.m001056 I
29842.m003531 Ricinus communis 29842.m003531 I
30128.m008910 Ricinus communis 30128.m008910 I
30147.m013923 Ricinus communis 30147.m013923 I
30170.m013647 Ricinus communis 30170.m013647 I
SapurV1A.0004s0390 Salix purpurea SapurV1A.0004s0390 I
SapurV1A.0067s0070 Salix purpurea SapurV1A.0067s0070 I
SapurV1A.0069s0110 Salix purpurea SapurV1A.0069s0110 I
SapurV1A.0127s0040 Salix purpurea SapurV1A.0127s0040 I
SapurV1A.0449s0300 Salix purpurea SapurV1A.0449s0300 I
SapurV1A.4388s0020 Salix purpurea SapurV1A.4388s0020 I
SELMODRAFT_159366 Selaginella moellendorffii SELMODRAFT_159366 I
SELMODRAFT_415291 Selaginella moellendorffii SELMODRAFT_415291 I
SELMODRAFT_448401 Selaginella moellendorffii SELMODRAFT_448401 I
SELMODRAFT_451276 Selaginella moellendorffii SELMODRAFT_451276 I
Si003268m.g Setaria italica Si003268m.g I
Si023561m.g Setaria italica Si023561m.g I
Si031454m.g Setaria italica Si031454m.g I
Si036193m.g Setaria italica Si036193m.g I
Si037920m.g Setaria italica Si037920m.g I
Si039908m.g Setaria italica Si039908m.g I
Solyc02g081120.2 Solanum lycopersicum Solyc02g081120.2 I
Solyc05g005090.2 Solanum lycopersicum Solyc05g005090.2 I
PGSC0003DMG400013493 Solanum tuberosum PGSC0003DMG400013493 I
PGSC0003DMG400016711 Solanum tuberosum PGSC0003DMG400016711 I
Sb01g006790 Sorghum bicolor Sb01g006790 I
Sb01g009460 Sorghum bicolor Sb01g009460 I
Sb01g009480 Sorghum bicolor Sb01g009480 I
Sb02g002200 Sorghum bicolor Sb02g002200 I
Sb03g012480 Sorghum bicolor Sb03g012480 I
Sb09g002520 Sorghum bicolor Sb09g002520 I
TCM_010433 Theobroma cacao TCM_010433 I
TCM_012104 Theobroma cacao TCM_012104 I
TCM_026767 Theobroma cacao TCM_026767 I
TCM_030302 Theobroma cacao TCM_030302 I
TCM_034627 Theobroma cacao TCM_034627 I
Traes_1AS_1B1587F7D Triticum aestivum Traes_1AS_1B1587F7D I
Traes_1BS_2156D66E1 Triticum aestivum Traes_1BS_2156D66E1 I
Traes_1DS_543CC7DC9 Triticum aestivum Traes_1DS_543CC7DC9 I
Traes_2AL_E687AF1BE Triticum aestivum Traes_2AL_E687AF1BE I
Traes_2BL_921BF570C Triticum aestivum Traes_2BL_921BF570C I
Traes_2DL_0D933D88B Triticum aestivum Traes_2DL_0D933D88B I
Traes_4AL_2334B226E Triticum aestivum Traes_4AL_2334B226E I
Traes_5BL_B2792D532 Triticum aestivum Traes_5BL_B2792D532 I
Traes_5DL_5FD3B95C7 Triticum aestivum Traes_5DL_5FD3B95C7 I
TRIUR3_30866 Triticum urartu TRIUR3_30866 I
TRIUR3_34593 Triticum urartu TRIUR3_34593 I
VIT_01s0127g00210 Vitis vinifera VIT_01s0127g00210 I
STM Vitis vinifera VIT_10s0116g00190 I
VIT_12s0059g01190 Vitis vinifera VIT_12s0059g01190 I
VIT_14s0060g01180 Vitis vinifera VIT_14s0060g01180 I
VIT_17s0000g08710 Vitis vinifera VIT_17s0000g08710 I
KNAT1 Vitis vinifera VIT_18s0001g08380 I
GRMZM2G017087 Zea mays GRMZM2G017087 I
GRMZM2G028041 Zea mays GRMZM2G028041 I
GRMZM2G087741 Zea mays GRMZM2G087741 D
GRMZM2G094241 Zea mays GRMZM2G094241 I
GRMZM2G135447 Zea mays GRMZM2G135447 D
GRMZM2G452178 Zea mays GRMZM2G452178 I
GRMZM5G832409 Zea mays GRMZM5G832409 I