CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLOINDRAFT_14813
(
Rhizophagus irregularis
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
GLOINDRAFT_14813
T330036_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ESA24040
Sox
33
99
LRAPNQFFIYRLAYIRELKKIIGESISMTRISPQISSSWSREPPEVKQAYKNLSGLTENRLKEMRKN
Links
Other
Sox
family TFs
Other
Rhizophagus irregularis
TFs
30 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GUITHDRAFT_73008
Guillardia theta
GUITHDRAFT_73008
N
0.435
NEUTE1DRAFT_103050
Neurospora tetrasperma
NEUTE1DRAFT_103050
I
0.445
GLOINDRAFT_33761
Rhizophagus irregularis
GLOINDRAFT_33761
N
0.504
GLOINDRAFT_9937
Rhizophagus irregularis
GLOINDRAFT_9937
N
0.415
GLOINDRAFT_92937
Rhizophagus irregularis
GLOINDRAFT_92937
N
0.424
GLOINDRAFT_36163
Rhizophagus irregularis
GLOINDRAFT_36163
N
0.430
GLOINDRAFT_349586
Rhizophagus irregularis
GLOINDRAFT_349586
N
0.492
GLOINDRAFT_348643
Rhizophagus irregularis
GLOINDRAFT_348643
N
0.417
GLOINDRAFT_347592
Rhizophagus irregularis
GLOINDRAFT_347592
N
0.436
GLOINDRAFT_346927
Rhizophagus irregularis
GLOINDRAFT_346927
N
0.424
GLOINDRAFT_34686
Rhizophagus irregularis
GLOINDRAFT_34686
N
0.480
GLOINDRAFT_342407
Rhizophagus irregularis
GLOINDRAFT_342407
N
0.425
GLOINDRAFT_342377
Rhizophagus irregularis
GLOINDRAFT_342377
N
0.456
GLOINDRAFT_340908
Rhizophagus irregularis
GLOINDRAFT_340908
N
0.421
GLOINDRAFT_34079
Rhizophagus irregularis
GLOINDRAFT_34079
N
0.504
GLOINDRAFT_11295
Rhizophagus irregularis
GLOINDRAFT_11295
N
0.462
GLOINDRAFT_33465
Rhizophagus irregularis
GLOINDRAFT_33465
N
0.569
GLOINDRAFT_330944
Rhizophagus irregularis
GLOINDRAFT_330944
N
0.518
GLOINDRAFT_319204
Rhizophagus irregularis
GLOINDRAFT_319204
N
0.476
GLOINDRAFT_30036
Rhizophagus irregularis
GLOINDRAFT_30036
N
0.442
GLOINDRAFT_30035
Rhizophagus irregularis
GLOINDRAFT_30035
N
0.504
GLOINDRAFT_25683
Rhizophagus irregularis
GLOINDRAFT_25683
N
0.487
GLOINDRAFT_22824
Rhizophagus irregularis
GLOINDRAFT_22824
N
0.580
GLOINDRAFT_224210
Rhizophagus irregularis
GLOINDRAFT_224210
N
0.474
GLOINDRAFT_17167
Rhizophagus irregularis
GLOINDRAFT_17167
N
0.512
GLOINDRAFT_17166
Rhizophagus irregularis
GLOINDRAFT_17166
N
0.572
GLOINDRAFT_15083
Rhizophagus irregularis
GLOINDRAFT_15083
N
0.618
GLOINDRAFT_14857
Rhizophagus irregularis
GLOINDRAFT_14857
N
0.460
GLOINDRAFT_13874
Rhizophagus irregularis
GLOINDRAFT_13874
N
0.421
GLOINDRAFT_13510
Rhizophagus irregularis
GLOINDRAFT_13510
N
0.416