CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLOINDRAFT_29935
(
Rhizophagus irregularis
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
GLOINDRAFT_29935
T330079_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ESA09979
Sox
71
140
IPRPLNSWLIFLKDFTAKIKTESNVKLCIKDISSMASKSWSNQPPQIKQFFEVLGVSAKQVHTLIFPGYK
Links
Other
Sox
family TFs
Other
Rhizophagus irregularis
TFs
49 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACYPI002893
Acyrthosiphon pisum
ACYPI002893
I
AAEL006597
Aedes aegypti
AAEL006597
I
ENSAMEG00000002866
Ailuropoda melanoleuca
ENSAMEG00000002866
I
ENSAMEG00000009342
Ailuropoda melanoleuca
ENSAMEG00000009342
I
Alligator_sinensis_CCG000534.1
Alligator sinensis
Alligator_sinensis_CCG000534.1
I
ENSAPLG00000014690
Anas platyrhynchos
ENSAPLG00000014690
I
ASIM_0001224701
Anisakis simplex
ASIM_0001224701
I
ENSACAG00000026683
Anolis carolinensis
ENSACAG00000026683
I
AARA010121
Anopheles arabiensis
AARA010121
I
AATE016309
Anopheles atroparvus
AATE016309
I
ACHR006588
Anopheles christyi
ACHR006588
I
ACOM028774
Anopheles coluzzii
ACOM028774
I
ACUA019412
Anopheles culicifacies
ACUA019412
I
ADIR005347
Anopheles dirus
ADIR005347
I
AEPI001627
Anopheles epiroticus
AEPI001627
I
AFAF013479
Anopheles farauti
AFAF013479
I
AFUN008966
Anopheles funestus
AFUN008966
I
AGAP003671
Anopheles gambiae
AGAP003671
I
AMAM011860
Anopheles maculatus
AMAM011860
I
AMEC017317
Anopheles melas
AMEC017317
I
AMEM005009
Anopheles merus
AMEM005009
I
AMIN004031
Anopheles minimus
AMIN004031
I
AQUA001538
Anopheles quadriannulatus
AQUA001538
I
ASIS007650
Anopheles sinensis
ASIS007650
I
ASTEI07437
Anopheles stephensi
ASTEI07437
I
GB47401
Apis mellifera
GB47401
I
ENSAMXG00000002250
Astyanax mexicanus
ENSAMXG00000002250
I
ENSAMXG00000003840
Astyanax mexicanus
ENSAMXG00000003840
I
ENSAMXG00000009415
Astyanax mexicanus
ENSAMXG00000009415
I
ENSAMXG00000015414
Astyanax mexicanus
ENSAMXG00000015414
I
ENSAMXG00000024837
Astyanax mexicanus
ENSAMXG00000024837
I
ACEP23863
Atta cephalotes
ACEP23863
I
BGLB010692
Biomphalaria glabrata
BGLB010692
I
BGIBMGA010706
Bombyx mori
BGIBMGA010706
I
ENSBTAP00000001615-D1
Bos grunniens
ENSBTAP00000001615-D1
I
NKX3-1
Bos taurus
ENSBTAG00000001221
I
NKX3-2
Bos taurus
ENSBTAG00000010896
I
estExt_fgenesh2_pg.C_1430013
Branchiostoma floridae
estExt_fgenesh2_pg.C_1430013
I
BTMF_0000772101
Brugia timori
BTMF_0000772101
I
BXY_0622200
Bursaphelenchus xylophilus
BXY_0622200
I
NKX3-2
Callithrix jacchus
ENSCJAG00000012159
I
NKX3-1
Callithrix jacchus
ENSCJAG00000020092
I
Aan_R009530
Calypte anna
Aan_R009530
I
ENSCAFG00000009107
Canis familiaris
ENSCAFG00000009107
I
NKX3-2
Canis familiaris
ENSCAFG00000015412
I
NKX2-6
Canis familiaris
ENSCAFG00000024691
I
CapteG79432
Capitella teleta
CapteG79432
I
NKX3-2
Cavia porcellus
ENSCPOG00000005449
I
ENSCPOG00000010557
Cavia porcellus
ENSCPOG00000010557
I
ENSCSAG00000016229
Chlorocebus sabaeus
ENSCSAG00000016229
I
ENSCSAG00000016338
Chlorocebus sabaeus
ENSCSAG00000016338
I
ENSCHOG00000011132
Choloepus hoffmanni
ENSCHOG00000011132
I
CLEC002956
Cimex lectularius
CLEC002956
I
ENSCING00000007395
Ciona intestinalis
ENSCING00000007395
D
hlx
Ciona intestinalis
ENSCING00000019191
I
csin109461
Clonorchis sinensis
csin109461
I
CGI_10023919
Crassostrea gigas
CGI_10023919
I
CpipJ_CPIJ004109
Culex pipiens
CpipJ_CPIJ004109
I
CPIJ004109
Culex quinquefasciatus
CPIJ004109
I
KGM_11246
Danaus plexippus
KGM_11246
I
nkx3.2
Danio rerio
ENSDARG00000037639
I
nkx3.3
Danio rerio
ENSDARG00000069327
I
nkx3-1
Danio rerio
ENSDARG00000078280
I
NKX3-2
Dasypus novemcinctus
ENSDNOG00000043074
I
NKX3-1
Dasypus novemcinctus
ENSDNOG00000044451
I
YQE_10102
Dendroctonus ponderosae
YQE_10102
I
GF18600
Drosophila ananassae
FBgn0095618
I
GG24598
Drosophila erecta
FBgn0116730
I
GH22032
Drosophila grimshawi
FBgn0129493
I
bap
Drosophila melanogaster
FBgn0004862
D
GI21951
Drosophila mojavensis
FBgn0144680
I
GL27337
Drosophila persimilis
FBgn0164918
I
GA20672
Drosophila pseudoobscura
FBgn0080666
I
bap
Drosophila sechellia
FBgn0067536
I
bap
Drosophila simulans
FBgn0067504
I
GJ14311
Drosophila virilis
FBgn0201526
I
GK14503
Drosophila willistoni
FBgn0216509
I
GE25732
Drosophila yakuba
FBgn0242790
I
ECANG7_00763
Echinococcus canadensis
ECANG7_00763
I
EmuJ_000895600
Echinococcus multilocularis
EmuJ_000895600
I
NKX3-1
Echinops telfairi
ENSETEG00000018790
I
ENSECAG00000001509
Equus caballus
ENSECAG00000001509
I
NKX2-6
Equus caballus
ENSECAG00000013714
I
NKX3-1
Erinaceus europaeus
ENSEEUG00000001113
I
ENSEEUG00000012691
Erinaceus europaeus
ENSEEUG00000012691
I
D915_02578
Fasciola hepatica
D915_02578
I
ENSFALG00000011121
Ficedula albicollis
ENSFALG00000011121
I
ENSGMOG00000005518
Gadus morhua
ENSGMOG00000005518
I
ENSGMOG00000018725
Gadus morhua
ENSGMOG00000018725
I
nkx3.3
Gasterosteus aculeatus
ENSGACG00000007573
I
nkx3-1
Gasterosteus aculeatus
ENSGACG00000010776
I
nkx3.2
Gasterosteus aculeatus
ENSGACG00000016378
I
NKX3-2
Gorilla gorilla
ENSGGOG00000008589
I
NKX3-1
Gorilla gorilla
ENSGGOG00000014369
I
Hsal_06436--XP_001120208.1_APIME
Harpegnathos saltator
Hsal_06436--XP_001120208.1_APIME
I
HMEL006181
Heliconius melpomene
HMEL006181
I
HelroG138724
Helobdella robusta
HelroG138724
I
HelroG148616
Helobdella robusta
HelroG148616
I
NKX3-2
Homo sapiens
ENSG00000109705
D
NKX3-1
Homo sapiens
ENSG00000167034
D
TTAC_0000184701
Hydatigera taeniaeformis
TTAC_0000184701
I
ENSSTOG00000021803
Ictidomys tridecemlineatus
ENSSTOG00000021803
I
ISCW014989
Ixodes scapularis
ISCW014989
I
ENSLACG00000003608
Latimeria chalumnae
ENSLACG00000003608
I
ENSLACG00000012763
Latimeria chalumnae
ENSLACG00000012763
I
ENSLOCG00000009031
Lepisosteus oculatus
ENSLOCG00000009031
I
ENSLOCG00000009892
Lepisosteus oculatus
ENSLOCG00000009892
I
ENSLOCG00000015015
Lepisosteus oculatus
ENSLOCG00000015015
I
LDEC009723
Leptinotarsa decemlineata
LDEC009723
I
nLs.2.1.2.g07743
Litomosoides sigmodontis
nLs.2.1.2.g07743
I
LotgiG60615
Lottia gigantea
LotgiG60615
I
NKX3-1
Loxodonta africana
ENSLAFG00000008941
I
NKX3-2
Loxodonta africana
ENSLAFG00000031404
I
LCUP000733
Lucilia cuprina
LCUP000733
I
ENSP00000370253
Macaca fascicularis
ENSP00000370253
I
ENSP00000371875
Macaca fascicularis
ENSP00000371875
I
NKX3-1
Macaca mulatta
ENSMMUG00000009796
I
ENSMMUG00000022026
Macaca mulatta
ENSMMUG00000022026
I
MESCA006298
Megaselia scalaris
MESCA006298
I
MCINX004875
Melitaea cinxia
MCINX004875
I
Minc11316
Meloidogyne incognita
Minc11316
I
MCOS_0000074801
Mesocestoides corti
MCOS_0000074801
I
ENSMICG00000000190
Microcebus murinus
ENSMICG00000000190
I
NKX3-1
Microcebus murinus
ENSMICG00000011189
I
NKX3-1
Monodelphis domestica
ENSMODG00000016789
I
NKX3-2
Monodelphis domestica
ENSMODG00000024753
I
MDOA010758
Musca domestica
MDOA010758
I
ENSMPUG00000000476
Mustela putorius furo
ENSMPUG00000000476
I
ENSMPUG00000003418
Mustela putorius furo
ENSMPUG00000003418
I
Nkx3-1
Mus musculus
ENSMUSG00000022061
D
Nkx3-2
Mus musculus
ENSMUSG00000049691
D
Myotis_brandtii_NKX3_10014306
Myotis brandtii
Myotis_brandtii_NKX3_10014306
I
NKX3-1
Myotis lucifugus
ENSMLUG00000006118
I
NKX3-2
Myotis lucifugus
ENSMLUG00000008362
I
NV25828
Nasonia vitripennis
NV25828
I
NEMVEDRAFT_v1g208034
Nematostella vectensis
NEMVEDRAFT_v1g208034
I
ENSNLEG00000015968
Nomascus leucogenys
ENSNLEG00000015968
I
ENSNLEG00000016256
Nomascus leucogenys
ENSNLEG00000016256
I
NKX3-1
Ochotona princeps
ENSOPRG00000003179
I
ENSOPRG00000005452
Ochotona princeps
ENSOPRG00000005452
I
Ocbimv22026957m.g
Octopus bimaculoides
Ocbimv22026957m.g
I
ENSONIG00000000279
Oreochromis niloticus
ENSONIG00000000279
I
ENSONIG00000002379
Oreochromis niloticus
ENSONIG00000002379
I
ENSONIG00000011762
Oreochromis niloticus
ENSONIG00000011762
I
ENSONIG00000018347
Oreochromis niloticus
ENSONIG00000018347
I
NKX3-1
Ornithorhynchus anatinus
ENSOANG00000008027
I
NKX3-1
Oryctolagus cuniculus
ENSOCUG00000004294
I
NKX3-2
Oryctolagus cuniculus
ENSOCUG00000009039
I
nkx3.2
Oryzias latipes
ENSORLG00000000593
I
ENSORLG00000007716
Oryzias latipes
ENSORLG00000007716
I
nkx3-1
Oryzias latipes
ENSORLG00000010925
I
NKX3-1
Otolemur garnettii
ENSOGAG00000001303
I
NKX3-2
Otolemur garnettii
ENSOGAG00000015615
I
ENSOARG00000010071
Ovis aries
ENSOARG00000010071
I
NKX3-1
Pan troglodytes
ENSPTRG00000020081
I
ENSPTRG00000031253
Pan troglodytes
ENSPTRG00000031253
I
ENSPANG00000004934
Papio anubis
ENSPANG00000004934
I
ENSPANG00000021310
Papio anubis
ENSPANG00000021310
I
PHUM439840
Pediculus humanus
PHUM439840
I
ENSPSIG00000012169
Pelodiscus sinensis
ENSPSIG00000012169
I
ENSPSIG00000017342
Pelodiscus sinensis
ENSPSIG00000017342
I
PPAI010327
Phlebotomus papatasi
PPAI010327
I
ENSPFOG00000002882
Poecilia formosa
ENSPFOG00000002882
I
ENSPFOG00000009440
Poecilia formosa
ENSPFOG00000009440
I
ENSPFOG00000009654
Poecilia formosa
ENSPFOG00000009654
I
ENSPFOG00000020885
Poecilia formosa
ENSPFOG00000020885
I
Pvit_15821
Pogona vitticeps
Pvit_15821
I
ENSPPYG00000014611
Pongo abelii
ENSPPYG00000014611
I
ENSPPYG00000018442
Pongo abelii
ENSPPYG00000018442
I
NKX3-2
Procavia capensis
ENSPCAG00000013077
I
ENSPCAG00000016644
Procavia capensis
ENSPCAG00000016644
I
PXEA_0003190801
Protopolystoma xenopodis
PXEA_0003190801
I
NKX3-2
Pteropus vampyrus
ENSPVAG00000002830
I
NKX3-1
Pteropus vampyrus
ENSPVAG00000005378
I
NKX2-6
Pteropus vampyrus
ENSPVAG00000005380
I
Nkx3-1
Rattus norvegicus
ENSRNOG00000015477
I
Nkx3-2
Rattus norvegicus
ENSRNOG00000060782
I
RPRC001122
Rhodnius prolixus
RPRC001122
I
Sakowv30040088m.g
Saccoglossus kowalevskii
Sakowv30040088m.g
I
ENSSHAG00000015475
Sarcophilus harrisii
ENSSHAG00000015475
I
A_02450
Schistosoma haematobium
A_02450
I
A_06201
Schistosoma haematobium
A_06201
I
Smp_140730
Schistosoma mansoni
Smp_140730
I
SMRZ_0000016501
Schistosoma margrebowiei
SMRZ_0000016501
I
SMTD_0000549701
Schistosoma mattheei
SMTD_0000549701
I
SMU15003549
Schmidtea mediterranea
SMU15003549
I
SINV22315
Solenopsis invicta
SINV22315
I
ENSSARG00000001895
Sorex araneus
ENSSARG00000001895
I
L893_g18140
Steinernema glaseri
L893_g18140
I
SMAR005030
Strigamia maritima
SMAR005030
I
SPU_013047
Strongylocentrotus purpuratus
SPU_013047
I
ENSSSCG00000024594
Sus scrofa
ENSSSCG00000024594
I
ENSSSCG00000028216
Sus scrofa
ENSSSCG00000028216
I
TASK_0000475201
Taenia asiatica
TASK_0000475201
I
TsM_000540100
Taenia solium
TsM_000540100
I
ENSTGUG00000004550
Taeniopygia guttata
ENSTGUG00000004550
I
NKX2-3
Takifugu rubripes
ENSTRUG00000002729
I
NKX2-3
Takifugu rubripes
ENSTRUG00000003800
I
nkx3.2
Takifugu rubripes
ENSTRUG00000014438
I
ENSTSYG00000007109
Tarsius syrichta
ENSTSYG00000007109
I
tetur04g08350
Tetranychus urticae
tetur04g08350
I
nkx3.2
Tetraodon nigroviridis
ENSTNIG00000015732
I
TCLT_0000478201
Thelazia callipaeda
TCLT_0000478201
I
TC012743
Tribolium castaneum
TC012743
I
D917_04750
Trichinella nativa
D917_04750
I
D918_06873
Trichuris suis
D918_06873
I
TTRE_0000463801
Trichuris trichiura
TTRE_0000463801
I
ENSTBEG00000002319
Tupaia belangeri
ENSTBEG00000002319
I
ENSTTRG00000003623
Tursiops truncatus
ENSTTRG00000003623
I
ENSTTRG00000012332
Tursiops truncatus
ENSTTRG00000012332
I
NKX3-1
Vicugna pacos
ENSVPAG00000004503
I
WUBG_10043
Wuchereria bancrofti
WUBG_10043
I
nkx3-1.L
Xenopus laevis
XB-GENE-479031
I
nkx3-1.S
Xenopus laevis
XB-GENE-6252708
I
nkx3-3.S
Xenopus laevis
XB-GENE-865322
I
nkx3-2.S
Xenopus laevis
XB-GENE-876836
I
nkx3-3
Xenopus tropicalis
XB-GENE-479908
I
nkx3-2
Xenopus tropicalis
XB-GENE-876834
I
XP_002932598
Xenopus tropicalis
XP_002932598
I
ENSXMAG00000005680
Xiphophorus maculatus
ENSXMAG00000005680
I
ENSXMAG00000016282
Xiphophorus maculatus
ENSXMAG00000016282
I
ENSXMAG00000020095
Xiphophorus maculatus
ENSXMAG00000020095
I
ENSXMAG00000020262
Xiphophorus maculatus
ENSXMAG00000020262
I