CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLOINDRAFT_47134
(
Rhizophagus irregularis
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
GLOINDRAFT_47134
T330175_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ESA07561
Sox
4
75
NPRPQNSFVIYRRNVQAEIAKEKGTTAAGRLDYVSKFAAKKWKQETQEVKELYGFLAACAKKVHDFMYPGYV
Links
Other
Sox
family TFs
Other
Rhizophagus irregularis
TFs
74 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
fgenesh1_pm.00609_#_235
Aspergillus carbonarius
fgenesh1_pm.00609_#_235
I
0.423
ACLA_049990
Aspergillus clavatus
CADACLAG00004890
I
0.423
CADAFLAG00002060
Aspergillus flavus
CADAFLAG00002060
I
0.423
AFUA_4G10820
Aspergillus fumigatus
CADAFUAG00008327
I
0.423
ANIA_01962
Aspergillus nidulans
CADANIAG00008622
I
0.417
CADANGAG00004297
Aspergillus niger
CADANGAG00004297
I
0.423
EURHEDRAFT_373724
Aspergillus ruber
EURHEDRAFT_373724
I
0.423
ATEG_03987
Aspergillus terreus
CADATEAG00009198
I
0.423
M437DRAFT_74676
Aureobasidium melanogenum
M437DRAFT_74676
I
0.439
M438DRAFT_346080
Aureobasidium pullulans
M438DRAFT_346080
I
0.439
AUEXF2481DRAFT_37338
Aureobasidium subglaciale
AUEXF2481DRAFT_37338
I
0.439
BATDEDRAFT_7482
Batrachochytrium dendrobatidis
BATDEDRAFT_7482
I
0.419
BAUCODRAFT_72427
Baudoinia compniacensis
BAUCODRAFT_72427
I
0.449
BAUCODRAFT_126300
Baudoinia compniacensis
BAUCODRAFT_126300
N
0.476
Bcin09g02870
Botrytis cinerea
Bcin09g02870
I
0.423
PVAR5_3110
Byssochlamys spectabilis
PVAR5_3110
I
0.423
CERSUDRAFT_123639
Ceriporiopsis subvermispora
CERSUDRAFT_123639
N
0.417
CERSUDRAFT_97591
Ceriporiopsis subvermispora
CERSUDRAFT_97591
N
0.433
CHGG_06584
Chaetomium globosum
CHGG_06584
N
0.438
CHGG_08188
Chaetomium globosum
CHGG_08188
I
0.423
CTHT_0006830
Chaetomium thermophilum
CTHT_0006830
I
0.434
CTHT_0011880
Chaetomium thermophilum
CTHT_0011880
N
0.419
CC1G_06994
Coprinopsis cinerea
CC1G_06994
I
0.440
estExt_fgenesh1_pg.C_20723
Cryphonectria parasitica
estExt_fgenesh1_pg.C_20723
I
0.423
YQE_11555
Dendroctonus ponderosae
YQE_11555
I
0.432
DOTSEDRAFT_67720
Dothistroma septosporum
DOTSEDRAFT_67720
I
0.423
UCREL1_7053
Eutypa lata
UCREL1_7053
I
0.444
UCREL1_2263
Eutypa lata
UCREL1_2263
I
0.427
GGTG_04596
Gaeumannomyces graminis
GGTG_04596
I
0.438
HelroG70896
Helobdella robusta
HelroG70896
I
0.461
MBM_09015
Marssonina brunnea
MBM_09015
I
0.423
Moror_9770
Moniliophthora roreri
Moror_9770
I
0.462
Moror_16653
Moniliophthora roreri
Moror_16653
I
0.417
MYCTH_2115740
Myceliophthora thermophila
MYCTH_2115740
N
0.436
estExt_fgenesh1_pg.C_10913
Mycosphaerella fijiensis
estExt_fgenesh1_pg.C_10913
I
0.452
NFIA_105270
Neosartorya fischeri
CADNFIAG00010303
I
0.423
NCU03481
Neurospora crassa
NCU03481
I
0.423
NEUTE1DRAFT_123419
Neurospora tetrasperma
NEUTE1DRAFT_123419
I
0.423
PITC_068990
Penicillium italicum
PITC_068990
I
0.423
PMAA_040750
Penicillium marneffei
PMAA_040750
I
0.417
PDE_06698
Penicillium oxalicum
PDE_06698
I
0.417
U727_00431010161
Penicillium solitum
U727_00431010161
I
0.423
PFICI_11445
Pestalotiopsis fici
PFICI_11445
I
0.449
PHLGIDRAFT_340250
Phlebiopsis gigantea
PHLGIDRAFT_340250
I
0.438
PISMIDRAFT_36586
Pisolithus microcarpus
PISMIDRAFT_36586
I
0.458
M404DRAFT_159338
Pisolithus tinctorius
M404DRAFT_159338
I
0.424
PredSwiss_CON647.2
Pneumocystis carinii
PredSwiss_CON647.2
I
0.449
PredSwiss_EST753.1
Pneumocystis carinii
PredSwiss_EST753.1
I
0.449
PNEG_02275
Pneumocystis murina
PNEG_02275
I
0.449
MYCFIDRAFT_86029
Pseudocercospora fijiensis
MYCFIDRAFT_86029
I
0.452
GMDG_03362
Pseudogymnoascus destructans
GMDG_03362
I
0.417
V499_06181
Pseudogymnoascus pannorum
V499_06181
I
0.417
PHSY_004115
Pseudozyma hubeiensis
PHSY_004115
I
0.501
GLOINDRAFT_56588
Rhizophagus irregularis
GLOINDRAFT_56588
I
0.423
GLOINDRAFT_75094
Rhizophagus irregularis
GLOINDRAFT_75094
I
0.419
GLOINDRAFT_49487
Rhizophagus irregularis
GLOINDRAFT_49487
N
0.549
GLOINDRAFT_25196
Rhizophagus irregularis
GLOINDRAFT_25196
I
0.489
GLOINDRAFT_336169
Rhizophagus irregularis
GLOINDRAFT_336169
N
0.538
GLOINDRAFT_96919
Rhizophagus irregularis
GLOINDRAFT_96919
N
0.415
GLOINDRAFT_97060
Rhizophagus irregularis
GLOINDRAFT_97060
N
0.537
GLOINDRAFT_338280
Rhizophagus irregularis
GLOINDRAFT_338280
I
0.432
GLOINDRAFT_342443
Rhizophagus irregularis
GLOINDRAFT_342443
N
0.561
GLOINDRAFT_47482
Rhizophagus irregularis
GLOINDRAFT_47482
N
0.438
GLOINDRAFT_47422
Rhizophagus irregularis
GLOINDRAFT_47422
I
0.489
GLOINDRAFT_349054
Rhizophagus irregularis
GLOINDRAFT_349054
N
0.573
RO3G_12867
Rhizopus oryzae
RO3G_12867
I
0.431
SBOR_3594
Sclerotinia borealis
SBOR_3594
I
0.423
SEPMUDRAFT_153151
Sphaerulina musiva
SEPMUDRAFT_153151
I
0.452
S40288_01674
Stachybotrys chartarum
S40288_01674
I
0.420
S40285_03081
Stachybotrys chlorohalonata
S40285_03081
I
0.420
PMAA_040750
Talaromyces marneffei
PMAA_040750
I
0.417
TSTA_077960
Talaromyces stipitatus
TSTA_077960
I
0.423
THITE_2111506
Thielavia terrestris
THITE_2111506
N
0.462
VDAG_07007
Verticillium dahliae
VDAG_07007
I
0.428