CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLOINDRAFT_55507
(
Rhizophagus irregularis
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
GLOINDRAFT_55507
T330188_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ESA07760
Sox
2
70
VPRPPNAFIIYRREKKAKHNDVFSKRTEAEISKVVGKMWQNEPEDTKDMYYRLAEHAKKKHLEKYSGYR
Links
Other
Sox
family TFs
Other
Rhizophagus irregularis
TFs
136 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
estExt_fgenesh1_pg.C_90194
Phytophthora capsici
estExt_fgenesh1_pg.C_90194
N
maker-pag1_scaffold_753-snap-gene-0.5
Pythium aphanidermatum
maker-pag1_scaffold_753-snap-gene-0.5
N
fgenesh_masked-par_contig_1744-abinit-gene-0.2
Pythium arrhenomanes
fgenesh_masked-par_contig_1744-abinit-gene-0.2
N
maker-par_contig_6289-fgenesh-gene-0.0
Pythium arrhenomanes
maker-par_contig_6289-fgenesh-gene-0.0
N
maker-par_contig_7729-fgenesh-gene-0.0
Pythium arrhenomanes
maker-par_contig_7729-fgenesh-gene-0.0
N
maker-pir_contig_1153-fgenesh-gene-0.2
Pythium irregulare
maker-pir_contig_1153-fgenesh-gene-0.2
I