CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh1_pg.C_90194
(
Phytophthora capsici
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
estExt_fgenesh1_pg.C_90194
T290805_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh1_pg.C_90194
Myb
3
49
TGLWSQEEHNKFLVAIKLYPNGPWRKIAAYIGTRSIRQVQTHAQKYH
Links
Other
Myb/SANT
family TFs
Other
Phytophthora capsici
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
fgenesh_scip_prom.28083.3493
Phytophthora lateralis
fgenesh_scip_prom.28083.3493
N
0.792
fgenesh_scip_prom.46568.8418
Phytophthora kernoviae
fgenesh_scip_prom.46568.8418
N
0.792
Phyra84539
Phytophthora ramorum
Phyra84539
N
0.792
HpaG808627
Hyaloperonospora arabidopsidis
HpaG808627
N
0.784
maker-par_contig_7729-fgenesh-gene-0.0
Pythium arrhenomanes
maker-par_contig_7729-fgenesh-gene-0.0
N
0.747
F443_16826
Phytophthora parasitica
F443_16826
N
0.742
PITG_17559
Phytophthora infestans
PITG_17559
N
0.732
Physo142772
Phytophthora sojae
Physo142772
N
0.714
maker-pag1_scaffold_178-fgenesh-gene-0.2
Pythium aphanidermatum
maker-pag1_scaffold_178-fgenesh-gene-0.2
N
0.664