CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLYMA01G07470
(
Glycine max
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
GLYMA01G07470
T330255_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GLYMA01G07470.2
Sox
4
72
KKRPSPPYILWMKDQRNEIKKVNPEAGFKEISTMLGVKWKTVTAEEKKPYEGIYHAEKEAYLQVIAKEK
GLYMA01G07470.2
Sox
120
186
PKHPMSAYFLFTNDRRAALAAENKNFLEVPKITFEEWKNMTEEQKRPYEEMAKKNKEQYALEMEAYK
Links
Other
Sox
family TFs
Other
Glycine max
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
orange1.1g017939m.g
Citrus sinensis
orange1.1g017939m.g
N
0.504
GLYMA05G37010
Glycine max
GLYMA05G37010
I
0.429
GLYMA08G02550
Glycine max
GLYMA08G02550
N
0.445
GLYMA15G29551
Glycine max
GLYMA15G29551
N
0.532
cassava45417.m1
Manihot esculenta
cassava45417.m1
N
0.502
TCM_016416
Theobroma cacao
TCM_016416
I
0.437