CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Kpol_1024p24
(
Vanderwaltozyma polyspora
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
Kpol_1024p24
T330812_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HMO1
M11344_2.00
Saccharomyces cerevisiae
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$_HMO1_01
0.645
0.855
For this family, TFs with SR scores >
0.415
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EDO16870
Sox
127
200
PKKPLTVFFAYSAYIRQELRQERERSGLAPLSSTEITQEISKKWKELSDSEKEKWKQAYHIELENYQREKQKYL
Links
Other
Sox
family TFs
Other
Vanderwaltozyma polyspora
TFs
29 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
e_gw.239.46.1
Branchiostoma floridae
e_gw.239.46.1
N
GPLIN_000208300
Globodera pallida
GPLIN_000208300
N
GPLIN_000747600
Globodera pallida
GPLIN_000747600
N
maker-nMf.1.1.scaf05303-snap-gene-0.9
Meloidogyne floridensis
maker-nMf.1.1.scaf05303-snap-gene-0.9
N
Minc14640
Meloidogyne incognita
Minc14640
N
ENSNLEG00000012707
Nomascus leucogenys
ENSNLEG00000012707
N