CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PV08_04655
(
Exophiala spinifera
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
PV08_04655
T332282_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU02819
M02490_2.00
Neurospora crassa
NNHNNNNNRN
NYNNNNNDNN
PBM
Weirauch et al.(2014)
pTH9672
0.566
0.627
For this family, TFs with SR scores >
0.415
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KIW17461
Sox
118
184
PERPPSAYVIFSNKVRDEVKDQNLSFTQIAKLVGDRWQKLDPARKEPFEAQANAAKERYNIQLSTYR
Links
Other
Sox
family TFs
Other
Exophiala spinifera
TFs
234 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Z519_02087
Cladophialophora bantiana
Z519_02087
N
G647_01344
Cladophialophora carrionii
G647_01344
N
A1O5_11371
Cladophialophora psammophila
A1O5_11371
N
A1O7_01283
Cladophialophora yegresii
A1O7_01283
N
Z517_03673
Fonsecaea pedrosoi
Z517_03673
N
NechaG100289
Fusarium solani
NechaG100289
N
estExt_fgenesh1_pg.C_sca_19_chr4_3_00087
Nectria haematococca
estExt_fgenesh1_pg.C_sca_19_chr4_3_00087
N