CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh1_pg.C_sca_19_chr4_3_00087
(
Nectria haematococca
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
estExt_fgenesh1_pg.C_sca_19_chr4_3_00087
T389645_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh1_pg.C_sca_19_chr4_3_00087
Zinc cluster
119
158
TGCITCKIRRVRCDEKKPSCNRCLWTGRKCDGYRDNSTEL
Links
Other
Zinc cluster
family TFs
Other
Nectria haematococca
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
NechaG100289
Fusarium solani
NechaG100289
N
0.683
CH063_04039
Colletotrichum higginsianum
CH063_04039
N
0.557
COCSADRAFT_21263
Bipolaris sorokiniana
COCSADRAFT_21263
N
0.553
Cob_02344
Colletotrichum orbiculare
Cob_02344
N
0.548
GLRG_10923
Colletotrichum graminicola
GLRG_10923
N
0.545
CGGC5_13480
Colletotrichum gloeosporioides
CGGC5_13480
N
0.542
HMPREF1541_10063
Cyphellophora europaea
HMPREF1541_10063
N
0.541