CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
lsd1
(
Schizosaccharomyces pombe
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
SPBC146.09c
T332706_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SPBC146.09c.1
Sox
862
921
LADQDKQRVTGDPEARATKNEIRAKLGKTWRALDSLGKQPWVDEINARRANYSTRLEEYQ
Links
Other
Sox
family TFs
Other
Schizosaccharomyces pombe
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PredSwiss_ASS2010_405.1
Pneumocystis carinii
PredSwiss_ASS2010_405.1
N
0.436
PredSwiss_CON4.1
Pneumocystis carinii
PredSwiss_CON4.1
N
0.521
PNEG_00396
Pneumocystis murina
PNEG_00396
N
0.436
SPOG_01553
Schizosaccharomyces cryophilus
SPOG_01553
N
0.472
SPOG_04221
Schizosaccharomyces cryophilus
SPOG_04221
N
0.700
SJAG_02401
Schizosaccharomyces japonicus
SJAG_02401
N
0.473
SOCG_02447
Schizosaccharomyces octosporus
SOCG_02447
N
0.472
SOCG_03518
Schizosaccharomyces octosporus
SOCG_03518
N
0.700
lsd2
Schizosaccharomyces pombe
SPAC23E2.02
N
0.477