Pvit_07238 (Pogona vitticeps)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 Pvit_07238 T333858_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Tcf7l2
M00198_2.00 		Mus musculus
NSWTCAAAVN
NBTTTGAWSN		 PBM
Badis et al.(2009)
Tcf7l2_3461 		0.741 1.000
Tcf7l2
M02646_2.00 		Mus musculus
SATCAAAGN
NCTTTGATS		 SELEX
Hallikas et al.(2006)
Tcf4 		0.741 1.000
TCF7L2
M08167_2.00 		Homo sapiens
NVASWTCAAAGVVN
NBBCTTTGAWSTBN		 ChIP-seq
Mathelier et al.(2014)
MA0523.1 		0.741 1.000
TCF7L2
M09393_2.00 		Homo sapiens
DGCAGSTGKS
SMCASCTGCH		 Misc
Kulakovskiy et al.(2013)
ITF2_HUMAN.H11MO.0.C 		0.741 1.000
TCF7L2
M09394_2.00 		Homo sapiens
VVASWTCAAAGVV
BBCTTTGAWSTBB		 Misc
Kulakovskiy et al.(2013)
TF7L2_HUMAN.H11MO.0.A 		0.741 1.000
Tcf7l2
M09401_2.00 		Mus musculus
VVASWTCAAAGVV
BBCTTTGAWSTBB		 Misc
Kulakovskiy et al.(2013)
TF7L2_MOUSE.H11MO.0.A 		0.741 1.000
TCF7L2
M09638_2.00 		Homo sapiens
CCTTTGAWST
ASWTCAAAGG		 Misc
Heinz et al.(2010)
K562-TCF7L2_GSE29196 		0.741 1.000
TCF7L2
M11316_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TCF4_Q5_01 		0.741 1.000
TCF7L2
M11317_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TCF4_Q5_02 		0.741 1.000
TCF7L2
M11318_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TCF4_Q5 		0.741 1.000
TCF7L2
M11319_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TCF7L2_06 		0.741 1.000
Lef1
M00200_2.00 		Mus musculus
NSWTCAAAVN
NBTTTGAWSN		 PBM
Badis et al.(2009)
Lef1_3504 		0.741 0.986
LEF1
M03511_2.00 		Homo sapiens
NRAGATCAAAGRVWW
WWBYCTTTGATCTYN		 SELEX
Jolma et al.(2013)
LEF1_1 		0.741 0.986
LEF1
M05771_2.00 		Homo sapiens
NSATCAAAS
STTTGATSN		 SELEX
Yin et al.(2017)
LEF1_eDBD_HT-SELEX_1 		0.741 0.986
LEF1
M05772_2.00 		Homo sapiens
WCATCGRGRCGCTGW
WCAGCGYCYCGATGW		 SELEX
Yin et al.(2017)
LEF1_eDBD_HT-SELEX_2 		0.741 0.986
LEF1
M05775_2.00 		Homo sapiens
ASATCAAAG
CTTTGATST		 SELEX
Yin et al.(2017)
LEF1_FL_HT-SELEX_1 		0.741 0.986
LEF1
M05776_2.00 		Homo sapiens
ACATCGRGRCGCTGW
WCAGCGYCYCGATGT		 SELEX
Yin et al.(2017)
LEF1_FL_HT-SELEX_2 		0.741 0.986
LEF1
M05895_2.00 		Homo sapiens
WTCAAAGNNN
NNNCTTTGAW		 SMiLE-seq
Isakova et al.(2017)
LEF1 		0.741 0.986
LEF1
M09392_2.00 		Homo sapiens
BSYTTTSWNNTBYH
DRVANNWSAAARSV		 Misc
Kulakovskiy et al.(2013)
LEF1_HUMAN.H11MO.0.A 		0.741 0.986
Lef1
M09402_2.00 		Mus musculus
BSYTTTSWNNTBYH
DRVANNWSAAARSV		 Misc
Kulakovskiy et al.(2013)
LEF1_MOUSE.H11MO.0.B 		0.741 0.986
LEF1
M11311_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LEF1_Q2_01 		0.741 0.986
LEF1
M11312_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LEF1_Q3 		0.741 0.986
LEF1
M11313_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LEF1_Q4 		0.741 0.986
LEF1
M11314_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LEF1_Q5_01 		0.741 0.986
LEF1
M11315_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LEF1_Q5 		0.741 0.986
LEF1
M05773_2.00 		Homo sapiens
ASATCAAAG
CTTTGATST		 SELEX
Yin et al.(2017)
LEF1_eDBD_Methyl-HT-SELEX_1 		0.741 0.986
LEF1
M05774_2.00 		Homo sapiens
WCATCGRGGCGCTGW
WCAGCGCCYCGATGW		 SELEX
Yin et al.(2017)
LEF1_eDBD_Methyl-HT-SELEX_2 		0.741 0.986
LEF1
M05777_2.00 		Homo sapiens
ASATCAAAG
CTTTGATST		 SELEX
Yin et al.(2017)
LEF1_FL_Methyl-HT-SELEX_1 		0.741 0.986
LEF1
M05778_2.00 		Homo sapiens
ACATCGRGRCGCTGW
WCAGCGYCYCGATGT		 SELEX
Yin et al.(2017)
LEF1_FL_Methyl-HT-SELEX_2 		0.741 0.986
Tcf7l1
M00207_2.00 		Mus musculus
NNNNWWDN
NHWWNNNN		 PBM
Badis et al.(2009)
Tcf3_3787 		0.741 0.928
TCF7L1
M03512_2.00 		Homo sapiens
AAAGATCAAAGG
CCTTTGATCTTT		 SELEX
Jolma et al.(2013)
TCF7L1_1 		0.741 0.928
TCF7L1
M05779_2.00 		Homo sapiens
RSATCAAAG
CTTTGATSY		 SELEX
Yin et al.(2017)
TCF7L1_eDBD_HT-SELEX_1 		0.741 0.928
TCF7L1
M05780_2.00 		Homo sapiens
ACATCGRGRCGCTGW
WCAGCGYCYCGATGT		 SELEX
Yin et al.(2017)
TCF7L1_eDBD_HT-SELEX_2 		0.741 0.928
TCF7L1
M09395_2.00 		Homo sapiens
NBBCTTTGAWSTB
VASWTCAAAGVVN		 Misc
Kulakovskiy et al.(2013)
TF7L1_HUMAN.H11MO.0.B 		0.741 0.928
Tcf7l1
M09406_2.00 		Mus musculus
BBCTTTGAWST
ASWTCAAAGVV		 Misc
Kulakovskiy et al.(2013)
TF7L1_MOUSE.H11MO.0.A 		0.741 0.928
Tcf7l1
M09407_2.00 		Mus musculus
NDGCAGSTGBB
VVCASCTGCHN		 Misc
Kulakovskiy et al.(2013)
TFE2_MOUSE.H11MO.0.A 		0.741 0.928
TCF7L1
M11320_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TCF3_01 		0.741 0.928
TCF7L1
M11321_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TCF3_Q6_01 		0.741 0.928
TCF7L1
M11322_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TCF3_Q6 		0.741 0.928
TCF7L1
M05781_2.00 		Homo sapiens
CTTTGATSY
RSATCAAAG		 SELEX
Yin et al.(2017)
TCF7L1_eDBD_Methyl-HT-SELEX_1 		0.741 0.928
TCF7L1
M05782_2.00 		Homo sapiens
ACATCGRGRCGCTGW
WCAGCGYCYCGATGT		 SELEX
Yin et al.(2017)
TCF7L1_eDBD_Methyl-HT-SELEX_2 		0.741 0.928
pan
M06451_2.00 		Drosophila melanogaster
DWYCAAAD
HTTTGRWH		 B1H
Zhu et al.(2011)
pan_FlyReg_FBgn0085432 		0.720 0.928
pan
M08428_2.00 		Drosophila melanogaster
WHNAAAVRNRSCGM
KCGSYNYBTTTNDW		 ChIP-chip
Mathelier et al.(2014)
MA0237.2 		0.720 0.928
pan
M11337_2.00 		Drosophila melanogaster
AAGATCAAAGG
CCTTTGATCTT		 Transfac
Matys et al.(2006)
I$TCF_1 		0.720 0.928
pan
M11338_2.00 		Drosophila melanogaster Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
I$TCF_Q6 		0.720 0.928
Tcf7
M00193_2.00 		Mus musculus
HNHNNNNNN
NNNNNNDND		 PBM
Badis et al.(2009)
Tcf7_0950 		0.716 0.986
Tcf7
M03532_2.00 		Mus musculus
AAASATCAAAGV
BCTTTGATSTTT		 SELEX
Jolma et al.(2013)
Tcf7_1 		0.716 0.986
TCF7
M05755_2.00 		Homo sapiens
DSATCAAWS
SWTTGATSH		 SELEX
Yin et al.(2017)
TCF7_eDBD_HT-SELEX_1 		0.716 0.986
TCF7
M05756_2.00 		Homo sapiens
WCWKCGYCYCGWTGW
WCAWCGRGRCGMWGW		 SELEX
Yin et al.(2017)
TCF7_eDBD_HT-SELEX_2 		0.716 0.986
TCF7
M05890_2.00 		Homo sapiens
NNASATCAAASNN
NNSTTTGATSTNN		 SMiLE-seq
Isakova et al.(2017)
TCF7 		0.716 0.986
TCF7
M09386_2.00 		Homo sapiens
NBBCTTTSAWSTBNBN
NVNVASWTSAAAGVVN		 Misc
Kulakovskiy et al.(2013)
TCF7_HUMAN.H11MO.0.A 		0.716 0.986
Tcf7
M09400_2.00 		Mus musculus
VVRVADSAAARVVVNV
BNBBBYTTTSHTBYBB		 Misc
Kulakovskiy et al.(2013)
TCF7_MOUSE.H11MO.0.A 		0.716 0.986
TCF7
M11294_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TCF1_Q5_01 		0.716 0.986
TCF7
M11295_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TCF1_Q5 		0.716 0.986
TCF7
M05757_2.00 		Homo sapiens
RSATCAAAS
STTTGATSY		 SELEX
Yin et al.(2017)
TCF7_eDBD_Methyl-HT-SELEX_1 		0.716 0.986
TCF7
M05758_2.00 		Homo sapiens
WCAWCGRGRCGMWGW
WCWKCGYCYCGWTGW		 SELEX
Yin et al.(2017)
TCF7_eDBD_Methyl-HT-SELEX_2 		0.716 0.986
pop-1
M00712_2.00 		Caenorhabditis elegans
NNHDWVNNNN
NNNNBWHDNN		 PBM
Narasimhan et al.(2015)
pTH9135 		0.515 0.551
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pvit_07238 Sox 171 239

Links

Other Sox family TFs
Other Pogona vitticeps TFs

512 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
nAv.1.0.1.g00022 Acanthocheilonema viteae nAv.1.0.1.g00022 I
AAEL004707 Aedes aegypti AAEL004707 I
ENSAMEG00000014091 Ailuropoda melanoleuca ENSAMEG00000014091 I
Alligator_sinensis_CCG013675.1 Alligator sinensis Alligator_sinensis_CCG013675.1 I
ENSAPLG00000004046 Anas platyrhynchos ENSAPLG00000004046 I
ACOC_0000843601 Angiostrongylus costaricensis ACOC_0000843601 I
ASIM_0001155801 Anisakis simplex ASIM_0001155801 I
HHEX Anolis carolinensis ENSACAG00000006660 I
AARA001840 Anopheles arabiensis AARA001840 I
AATE006277 Anopheles atroparvus AATE006277 I
ACHR001525 Anopheles christyi ACHR001525 I
ACOM034050 Anopheles coluzzii ACOM034050 I
ACUA024331 Anopheles culicifacies ACUA024331 I
ADIR002846 Anopheles dirus ADIR002846 I
AEPI001110 Anopheles epiroticus AEPI001110 I
AFAF018650 Anopheles farauti AFAF018650 I
AFUN007808 Anopheles funestus AFUN007808 I
AGAP001389 Anopheles gambiae AGAP001389 I
AMAM015319 Anopheles maculatus AMAM015319 I
AMEC012825 Anopheles melas AMEC012825 I
AMEM017315 Anopheles merus AMEM017315 I
AMIN000568 Anopheles minimus AMIN000568 I
AQUA006568 Anopheles quadriannulatus AQUA006568 I
ASIS014034 Anopheles sinensis ASIS014034 I
ASTEI07538 Anopheles stephensi ASTEI07538 I
Afo_R002655 Aptenodytes forsteri Afo_R002655 I
ASU_02199 Ascaris suum ASU_02199 I
ENSAMXG00000011188 Astyanax mexicanus ENSAMXG00000011188 I
BGIBMGA010054 Bombyx mori BGIBMGA010054 I
ENSBTAP00000018899-D1 Bos grunniens ENSBTAP00000018899-D1 I
HHEX Bos taurus ENSBTAG00000014217 I
e_gw.54.243.1 Branchiostoma floridae e_gw.54.243.1 I
e_gw.56.215.1 Branchiostoma floridae e_gw.56.215.1 I
Bm5107 Brugia malayi Bm5107 I
BTMF_0001400701 Brugia timori BTMF_0001400701 I
BXY_0632900 Bursaphelenchus xylophilus BXY_0632900 I
CBN29205 Caenorhabditis brenneri CBN29205 I
CBG08137 Caenorhabditis briggsae CBG08137 I
pha-2 Caenorhabditis elegans WBGene00004011 D
CRE17126 Caenorhabditis remanei CRE17126 I
HHEX Callithrix jacchus ENSCJAG00000008627 I
HHEX Canis familiaris ENSCAFG00000007502 I
CapteG110019 Capitella teleta CapteG110019 I
CapteG129537 Capitella teleta CapteG129537 I
ENSCPOG00000021993 Cavia porcellus ENSCPOG00000021993 I
Cmyd_10016939 Chelonia mydas Cmyd_10016939 I
ENSCSAG00000006543 Chlorocebus sabaeus ENSCSAG00000006543 I
HHEX Choloepus hoffmanni ENSCHOG00000005837 I
hex Ciona intestinalis ENSCING00000001270 I
ENSCSAVG00000001801 Ciona savignyi ENSCSAVG00000001801 I
CGI_10025054 Crassostrea gigas CGI_10025054 I
CpipJ_CPIJ003318 Culex pipiens CpipJ_CPIJ003318 I
CPIJ003318 Culex quinquefasciatus CPIJ003318 I
KGM_13906 Danaus plexippus KGM_13906 I
DAPPUDRAFT_229438 Daphnia pulex DAPPUDRAFT_229438 I
HHEX Dasypus novemcinctus ENSDNOG00000041940 I
nDi.2.2.2.g05290 Dirofilaria immitis nDi.2.2.2.g05290 I
DME_0000899101 Dracunculus medinensis DME_0000899101 I
GF18520 Drosophila ananassae FBgn0095538 I
GG14915 Drosophila erecta FBgn0107169 I
GH19308 Drosophila grimshawi FBgn0126773 I
HHEX Drosophila melanogaster FBgn0038852 D
GI23524 Drosophila mojavensis FBgn0146250 I
GL12681 Drosophila persimilis FBgn0150287 I
GA20065 Drosophila pseudoobscura FBgn0080061 I
GM15106 Drosophila sechellia FBgn0170026 I
GD20010 Drosophila simulans FBgn0191493 I
GJ10276 Drosophila virilis FBgn0197562 I
GK13080 Drosophila willistoni FBgn0215089 I
HHEX Equus caballus ENSECAG00000005199 I
HHEX Felis catus ENSFCAG00000023875 I
ENSFALG00000007921 Ficedula albicollis ENSFALG00000007921 I
ENSGMOG00000011697 Gadus morhua ENSGMOG00000011697 I
ENSGALG00000029169 Gallus gallus ENSGALG00000029169 I
HHEX Gasterosteus aculeatus ENSGACG00000015385 I
GPLIN_000004000 Globodera pallida GPLIN_000004000 I
ENSGGOG00000026464 Gorilla gorilla ENSGGOG00000026464 I
ENSGGOG00000027676 Gorilla gorilla ENSGGOG00000027676 I
HCOI01904700 Haemonchus contortus HCOI01904700 I
HPLM_0000551901 Haemonchus placei HPLM_0000551901 I
HMEL004646 Heliconius melpomene HMEL004646 I
HelroG80789 Helobdella robusta HelroG80789 I
HHEX Homo sapiens ENSG00000152804 I
ENSSTOG00000006255 Ictidomys tridecemlineatus ENSSTOG00000006255 I
ENSLACG00000009588 Latimeria chalumnae ENSLACG00000009588 I
ENSLACG00000014170 Latimeria chalumnae ENSLACG00000014170 I
ENSLOCG00000007051 Lepisosteus oculatus ENSLOCG00000007051 I
LOAG_11830 Loa loa LOAG_11830 I
LotgiG128951 Lottia gigantea LotgiG128951 I
ENSLAFG00000005359 Loxodonta africana ENSLAFG00000005359 I
LCUP007736 Lucilia cuprina LCUP007736 I
LLOJ007496 Lutzomyia longipalpis LLOJ007496 I
ENSP00000282728 Macaca fascicularis ENSP00000282728 I
HHEX Macaca mulatta ENSMMUG00000011789 I
ENSMEUG00000004291 Macropus eugenii ENSMEUG00000004291 I
MESCA008304 Megaselia scalaris MESCA008304 I
ENSMGAG00000009052 Meleagris gallopavo ENSMGAG00000009052 I
augustus_masked-nMf.1.1.scaf09384-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf09384-processed-gene-0.0 I
MhA1_Contig193.frz3.gene1 Meloidogyne hapla MhA1_Contig193.frz3.gene1 I
HHEX Monodelphis domestica ENSMODG00000006444 I
ENSMPUG00000017219 Mustela putorius furo ENSMPUG00000017219 I
Hhex Mus musculus ENSMUSG00000024986 I
Myotis_brandtii_KIF11_10018005 Myotis brandtii Myotis_brandtii_KIF11_10018005 I
ENSMLUG00000013333 Myotis lucifugus ENSMLUG00000013333 I
ENSMLUG00000024763 Myotis lucifugus ENSMLUG00000024763 I
NEMVEDRAFT_v1g39891 Nematostella vectensis NEMVEDRAFT_v1g39891 I
NBR_0000887601 Nippostrongylus brasiliensis NBR_0000887601 I
HHEX Ochotona princeps ENSOPRG00000003896 I
OFLC_0000354301 Onchocerca flexuosa OFLC_0000354301 I
nOo.2.0.1.g09114 Onchocerca ochengi nOo.2.0.1.g09114 I
WBGene00240685 Onchocerca volvulus WBGene00240685 I
Ogr00908 Ophisaurus gracilis Ogr00908 I
ENSONIG00000007247 Oreochromis niloticus ENSONIG00000007247 I
HHEX Oryctolagus cuniculus ENSOCUG00000016719 I
HHEX Otolemur garnettii ENSOGAG00000015201 I
HHEX Pan troglodytes ENSPTRG00000002760 I
ENSPANG00000021555 Papio anubis ENSPANG00000021555 I
PTRK_0000720600 Parastrongyloides trichosuri PTRK_0000720600 I
ENSPSIG00000015884 Pelodiscus sinensis ENSPSIG00000015884 I
ENSPMAG00000009445 Petromyzon marinus ENSPMAG00000009445 I
ENSPFOG00000009869 Poecilia formosa ENSPFOG00000009869 I
Pvit_14369 Pogona vitticeps Pvit_14369 I
ENSPPYG00000002486 Pongo abelii ENSPPYG00000002486 I
scaffold24-EXSNAP2012.65 Pristionchus exspectatus scaffold24-EXSNAP2012.65 I
HHEX Pteropus vampyrus ENSPVAG00000007094 I
Hhex Rattus norvegicus ENSRNOG00000016595 I
RSKR_0000094800 Rhabditophanes kr3021 RSKR_0000094800 I
nRc.2.0.1.g06585 Romanomermis culicivorax nRc.2.0.1.g06585 I
Sakowv30040087m.g Saccoglossus kowalevskii Sakowv30040087m.g I
ENSSHAG00000018185 Sarcophilus harrisii ENSSHAG00000018185 I
L596_g25649 Steinernema carpocapsae L596_g25649 I
L889_g29725 Steinernema feltiae L889_g29725 I
L898_g1404 Steinernema monticolum L898_g1404 I
L892_g7017 Steinernema scapterisci L892_g7017 I
SMAR000779 Strigamia maritima SMAR000779 I
SPU_027215 Strongylocentrotus purpuratus SPU_027215 I
SPAL_0000841600 Strongyloides papillosus SPAL_0000841600 I
SSTP_0000145800 Strongyloides stercoralis SSTP_0000145800 I
SVE_1799000 Strongyloides venezuelensis SVE_1799000 I
ENSSSCG00000010472 Sus scrofa ENSSSCG00000010472 I
ENSTGUG00000008924 Taeniopygia guttata ENSTGUG00000008924 I
ENSTGUG00000013882 Taeniopygia guttata ENSTGUG00000013882 I
HHEX Takifugu rubripes ENSTRUG00000004234 I
TELCIR_00798 Teladorsagia circumcincta TELCIR_00798 I
tetur29g00560 Tetranychus urticae tetur29g00560 I
HHEX Tetraodon nigroviridis ENSTNIG00000005879 I
TCLT_0000379201 Thelazia callipaeda TCLT_0000379201 I
TC004555 Tribolium castaneum TC004555 I
TriadG9560 Trichoplax adhaerens TriadG9560 I
ENSTBEG00000001339 Tupaia belangeri ENSTBEG00000001339 I
HHEX Tursiops truncatus ENSTTRG00000012365 I
HHEX Vicugna pacos ENSVPAG00000009916 I
WUBG_10995 Wuchereria bancrofti WUBG_10995 I
hhex.L Xenopus laevis XB-GENE-865680 I
hhex Xenopus tropicalis XB-GENE-487159 I
L798_02156 Zootermopsis nevadensis L798_02156 I