estExt_Genewise1.C_610004 (Physcomitrella patens)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 estExt_Genewise1.C_610004 T334067_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
estExt_Genewise1.C_610004 Sox 144 210
estExt_Genewise1.C_610004 Sox 263 329
estExt_Genewise1.C_610004 Sox 407 475

Links

Other Sox family TFs
Other Physcomitrella patens TFs

4 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000002698 Ailuropoda melanoleuca ENSAMEG00000002698 I
ENSBTAP00000000499-D1 Bos grunniens ENSBTAP00000000499-D1 I
ZNF212 Bos taurus ENSBTAG00000000389 I
ZNF212 Callithrix jacchus ENSCJAG00000010260 I
ZNF282 Canis familiaris ENSCAFG00000004442 I
ZNF212 Dasypus novemcinctus ENSDNOG00000008381 I
Zfp212 Dipodomys ordii ENSDORG00000000581 I
ZNF212 Equus caballus ENSECAG00000012758 I
ZNF212 Felis catus ENSFCAG00000022357 I
ZNF783 Gorilla gorilla ENSGGOG00000006463 I
ZNF212 Homo sapiens ENSG00000170260 D
ENSP00000338572 Macaca fascicularis ENSP00000338572 I
ZNF212 Macaca mulatta ENSMMUG00000011788 I
ENSMICG00000016621 Microcebus murinus ENSMICG00000016621 I
Zfp212 Mus musculus ENSMUSG00000052763 I
ENSNLEG00000026751 Nomascus leucogenys ENSNLEG00000026751 I
ZNF212 Oryctolagus cuniculus ENSOCUG00000008427 I
ZNF212 Otolemur garnettii ENSOGAG00000031023 I
ZNF212 Pan troglodytes ENSPTRG00000019842 I
ENSPANG00000008719 Papio anubis ENSPANG00000008719 I
ENSPPYG00000018152 Pongo abelii ENSPPYG00000018152 I
ZNF212 Procavia capensis ENSPCAG00000005393 N
ZNF212 Pteropus vampyrus ENSPVAG00000010869 I
Zfp212 Rattus norvegicus ENSRNOG00000006711 I
ENSSHAG00000018312 Sarcophilus harrisii ENSSHAG00000018312 I
ENSSSCG00000016777 Sus scrofa ENSSSCG00000016777 I
ZNF212 Tupaia belangeri ENSTBEG00000015249 I
ZNF212 Tursiops truncatus ENSTTRG00000015689 I
ZNF212 Vicugna pacos ENSVPAG00000009124 I