mgf006113m (Mimulus guttatus)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 mgf006113m T334284_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HMG-1
M02720_2.00 		Pisum sativum
STYGTDHTY
RADHACRAS		 SELEX
Mathelier et al.(2014)
MA0044.1 		0.621 0.681
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
mgf006113m Sox 37 106

Links

Other Sox family TFs
Other Mimulus guttatus TFs

301 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_21871 Aegilops tauschii F775_21871 I 0.000
F775_27540 Aegilops tauschii F775_27540 N 0.000
Aquca_003_00899 Aquilegia coerulea Aquca_003_00899 I 0.000
Aquca_008_00175 Aquilegia coerulea Aquca_008_00175 I 0.000
ARF18 Arabidopsis lyrata fgenesh1_pg.C_scaffold_5002633 I 0.000
ARF11 Arabidopsis thaliana AT2G46530 I 0.000
ARF18 Arabidopsis thaliana AT3G61830 I 0.000
Bostr.25993s0113 Boechera stricta Bostr.25993s0113 I 0.000
BRADI3G45880 Brachypodium distachyon BRADI3G45880 I 0.000
Bo01141s010 Brassica oleracea Bo01141s010 I 0.000
Bo3g039330 Brassica oleracea Bo3g039330 I 0.000
Bo4g008150 Brassica oleracea Bo4g008150 I 0.000
Bo8g097320 Brassica oleracea Bo8g097320 I 0.000
Bra004530 Brassica rapa Bra004530 I 0.000
Bra014419 Brassica rapa Bra014419 I 0.000
PK02218.1 Cannabis sativa PK02218.1 I 0.000
PK07904.1 Cannabis sativa PK07904.1 I 0.000
PK12669.1 Cannabis sativa PK12669.1 I 0.000
PK16974.1 Cannabis sativa PK16974.1 I 0.000
PK18282.1 Cannabis sativa PK18282.1 I 0.000
Cagra.0050s0046 Capsella grandiflora Cagra.0050s0046 I 0.000
Carubv10022841m.g Capsella rubella Carubv10022841m.g I 0.000
evm.TU.supercontig_15.1 Carica papaya evm.TU.supercontig_15.1 I 0.000
Ca_05681 Cicer arietinum Ca_05681 I 0.000
Ca_21948 Cicer arietinum Ca_21948 I 0.000
Ca_23296 Cicer arietinum Ca_23296 I 0.000
Cla013021 Citrullus lanatus Cla013021 I 0.000
Cla019614 Citrullus lanatus Cla019614 I 0.000
Ciclev10019131m.g Citrus clementina Ciclev10019131m.g I 0.000
Ciclev10027839m.g Citrus clementina Ciclev10027839m.g I 0.000
Ciclev10030696m.g Citrus clementina Ciclev10030696m.g I 0.000
orange1.1g003580m.g Citrus sinensis orange1.1g003580m.g I 0.000
orange1.1g005491m.g Citrus sinensis orange1.1g005491m.g I 0.000
Cucsa.078800 Cucumis sativus Cucsa.078800 I 0.000
Cucsa.156920 Cucumis sativus Cucsa.156920 I 0.000
Eucgr.B03551 Eucalyptus grandis Eucgr.B03551 I 0.000
Eucgr.D01764 Eucalyptus grandis Eucgr.D01764 I 0.000
Eucgr.G00076 Eucalyptus grandis Eucgr.G00076 I 0.000
Eucgr.K02197 Eucalyptus grandis Eucgr.K02197 I 0.000
gene06434-v1.0-hybrid Fragaria vesca gene06434-v1.0-hybrid I 0.000
GLYMA03G17450 Glycine max GLYMA03G17450 I 0.000
GLYMA07G32300 Glycine max GLYMA07G32300 I 0.000
GLYMA08G01100 Glycine max GLYMA08G01100 I 0.000
GLYMA13G24240 Glycine max GLYMA13G24240 I 0.000
GLYMA15G08540 Glycine max GLYMA15G08540 I 0.000
Gorai.001G054600 Gossypium raimondii Gorai.001G054600 I 0.000
Gorai.007G026900 Gossypium raimondii Gorai.007G026900 I 0.000
Gorai.007G109500 Gossypium raimondii Gorai.007G109500 I 0.000
Gorai.008G126200 Gossypium raimondii Gorai.008G126200 I 0.000
MLOC_64596 Hordeum vulgare MLOC_64596 I 0.000
MLOC_65945 Hordeum vulgare MLOC_65945 I 0.000
chr4.CM0175.280.nc Lotus japonicus chr4.CM0175.280.nc I 0.000
LjSGA_144865.1 Lotus japonicus LjSGA_144865.1 I 0.000
MDP0000258032 Malus domestica MDP0000258032 I 0.000
MDP0000259062 Malus domestica MDP0000259062 N 0.000
cassava42787.valid.m1 Manihot esculenta cassava42787.valid.m1 I 0.000
cassava42788.valid.m1 Manihot esculenta cassava42788.valid.m1 I 0.000
cassava42789.valid.m1 Manihot esculenta cassava42789.valid.m1 I 0.000
cassava43609.valid.m1 Manihot esculenta cassava43609.valid.m1 I 0.000
cassava45422.m1 Manihot esculenta cassava45422.m1 I 0.000
cassava45423.m1 Manihot esculenta cassava45423.m1 I 0.000
cassava45424.m1 Manihot esculenta cassava45424.m1 I 0.000
cassava45425.m1 Manihot esculenta cassava45425.m1 I 0.000
cassava45426.m1 Manihot esculenta cassava45426.m1 I 0.000
cassava6009.valid.m1 Manihot esculenta cassava6009.valid.m1 I 0.000
mgf006511m Mimulus guttatus mgf006511m I 0.000
mgf015308m Mimulus guttatus mgf015308m I 0.000
mgf020855m Mimulus guttatus mgf020855m I 0.000
GSMUA_Achr10G15100_001 Musa acuminata GSMUA_Achr10G15100_001 I 0.000
GSMUA_Achr6G07390_001 Musa acuminata GSMUA_Achr6G07390_001 I 0.000
OBART01G08640 Oryza barthii OBART01G08640 I 0.000
OB12G20020 Oryza brachyantha OB12G20020 I 0.000
ORGLA01G0077700 Oryza glaberrima ORGLA01G0077700 I 0.000
OGLUM01G09880 Oryza glumaepatula OGLUM01G09880 I 0.000
BGIOSGA003093 Oryza indica BGIOSGA003093 I 0.000
OLONG_005875 Oryza longistaminata OLONG_005875 I 0.000
OMERI01G08660 Oryza meridionalis OMERI01G08660 I 0.000
OPUNC01G08500 Oryza punctata OPUNC01G08500 I 0.000
OPUNC04G11520 Oryza punctata OPUNC04G11520 I 0.000
ORUFI01G09450 Oryza rufipogon ORUFI01G09450 I 0.000
ARF1 Oryza sativa OS01G0236300 I 0.000
Pavir.Aa01676 Panicum virgatum Pavir.Aa01676 I 0.000
Pavir.Cb00753 Panicum virgatum Pavir.Cb00753 I 0.000
Pavir.Ea03860 Panicum virgatum Pavir.Ea03860 I 0.000
Pavir.Eb03734 Panicum virgatum Pavir.Eb03734 I 0.000
Pavir.J11622 Panicum virgatum Pavir.J11622 I 0.000
PDK_20s1428911g001 Phoenix dactylifera PDK_20s1428911g001 I 0.000
PDK_20s1477241g001 Phoenix dactylifera PDK_20s1477241g001 I 0.000
PDK_20s1585531g001 Phoenix dactylifera PDK_20s1585531g001 I 0.000
PDK_20s1651081g001 Phoenix dactylifera PDK_20s1651081g001 I 0.000
POPTR_0004s04970 Populus trichocarpa POPTR_0004s04970 I 0.000
POPTR_0004s23770 Populus trichocarpa POPTR_0004s23770 I 0.000
POPTR_0011s05830 Populus trichocarpa POPTR_0011s05830 I 0.000
POPTR_0015s11660 Populus trichocarpa POPTR_0015s11660 I 0.000
XM_002320618.1 Populus trichocarpa POPTR_0020s00210 I 0.000
Pm018352 Prunus mume Pm018352 I 0.000
Pm031349 Prunus mume Pm031349 I 0.000
PRUPE_ppa002065m1g Prunus persica PRUPE_ppa002065m1g I 0.000
PRUPE_ppa002230mg Prunus persica PRUPE_ppa002230mg I 0.000
30068.m002516 Ricinus communis 30068.m002516 I 0.000
SapurV1A.0003s1010 Salix purpurea SapurV1A.0003s1010 I 0.000
SapurV1A.0012s0780 Salix purpurea SapurV1A.0012s0780 I 0.000
SapurV1A.0422s0040 Salix purpurea SapurV1A.0422s0040 I 0.000
Si000340m.g Setaria italica Si000340m.g I 0.000
Si016562m.g Setaria italica Si016562m.g I 0.000
Si021216m.g Setaria italica Si021216m.g I 0.000
Solyc03g118290.2 Solanum lycopersicum Solyc03g118290.2 I 0.000
Sb03g044630 Sorghum bicolor Sb03g044630 I 0.000
TCM_004526 Theobroma cacao TCM_004526 I 0.000
TCM_005126 Theobroma cacao TCM_005126 I 0.000
TCM_029792 Theobroma cacao TCM_029792 I 0.000
Traes_3AS_9594B1341 Triticum aestivum Traes_3AS_9594B1341 N 0.000
TRAES3BF007300580CFD_g Triticum aestivum TRAES3BF007300580CFD_g I 0.000
Traes_3DL_1FC3735D9 Triticum aestivum Traes_3DL_1FC3735D9 I 0.000
Traes_3DL_BC7A7E056 Triticum aestivum Traes_3DL_BC7A7E056 I 0.000
TRIUR3_17755 Triticum urartu TRIUR3_17755 I 0.000
TRIUR3_28704 Triticum urartu TRIUR3_28704 I 0.000
ARF1 Vitis vinifera VIT_12s0035g01800 I 0.000
ARF2 Vitis vinifera VIT_17s0000g00320 I 0.000
GRMZM2G006042 Zea mays GRMZM2G006042 I 0.000
GRMZM2G338259 Zea mays GRMZM2G338259 I 0.000
GRMZM2G702026 Zea mays GRMZM2G702026 I 0.000