Sakowv30005216m.g (Saccoglossus kowalevskii)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 Sakowv30005216m.g T334338_2.00 JGI:Metazome (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Hmg20b
M02487_2.00 		Mus musculus
NNATTATWHWN
NWDWATAATNN		 PBM
Weirauch et al.(2014)
pTH8555 		0.442 0.478
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
23947363_peptide Sox 260 328

Links

Other Sox family TFs
Other Saccoglossus kowalevskii TFs

93 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
nAv.1.0.1.g00338 Acanthocheilonema viteae nAv.1.0.1.g00338 N
ACYPI006497 Acyrthosiphon pisum ACYPI006497 N
AAEL017280 Aedes aegypti AAEL017280 N
ANCCAN_09492 Ancylostoma caninum ANCCAN_09492 N
ANCCEY_03110 Ancylostoma ceylanicum ANCCEY_03110 N
ANCDUO_04788 Ancylostoma duodenale ANCDUO_04788 N
AALB003072 Anopheles albimanus AALB003072 N
AARA000452 Anopheles arabiensis AARA000452 N
AATE006796 Anopheles atroparvus AATE006796 N
ACHR005336 Anopheles christyi ACHR005336 N
ACUA025715 Anopheles culicifacies ACUA025715 N
ADAC008556 Anopheles darlingi ADAC008556 N
ADIR002498 Anopheles dirus ADIR002498 N
AEPI003661 Anopheles epiroticus AEPI003661 N
AFAF010393 Anopheles farauti AFAF010393 N
AFUN009891 Anopheles funestus AFUN009891 N
AGAP001786 Anopheles gambiae AGAP001786 N
AMAM004700 Anopheles maculatus AMAM004700 N
AMEC021754 Anopheles melas AMEC021754 N
AMEM013442 Anopheles merus AMEM013442 N
AMIN000696 Anopheles minimus AMIN000696 N
AQUA004105 Anopheles quadriannulatus AQUA004105 N
ASTEI11512 Anopheles stephensi ASTEI11512 N
ACEP26642 Atta cephalotes ACEP26642 N
fgenesh1_pg.1__154 Bigelowiella natans fgenesh1_pg.1__154 N
BGLB000541 Biomphalaria glabrata BGLB000541 I
BGIBMGA010273 Bombyx mori BGIBMGA010273 N
Bm1891 Brugia malayi Bm1891 N
BTMF_0001195401 Brugia timori BTMF_0001195401 N
BXY_0663500 Bursaphelenchus xylophilus BXY_0663500 N
CBN07938 Caenorhabditis brenneri CBN07938 N
CBG12337 Caenorhabditis briggsae CBG12337 N
let-526 Caenorhabditis elegans WBGene00002717 N
CJA11729 Caenorhabditis japonica CJA11729 N
CRE29533 Caenorhabditis remanei CRE29533 N
Cflo_01219--XP_395512.3_APIME Camponotus floridanus Cflo_01219--XP_395512.3_APIME N
CLEC012210 Cimex lectularius CLEC012210 N
csin104729 Clonorchis sinensis csin104729 N
CGI_10006980 Crassostrea gigas CGI_10006980 I
CpipJ_CPIJ010152 Culex pipiens CpipJ_CPIJ010152 N
CPIJ010152 Culex quinquefasciatus CPIJ010152 N
KGM_12579 Danaus plexippus KGM_12579 N
DAPPUDRAFT_327651 Daphnia pulex DAPPUDRAFT_327651 N
YQE_09239 Dendroctonus ponderosae YQE_09239 N
nDi.2.2.2.g04479 Dirofilaria immitis nDi.2.2.2.g04479 N
DME_0001005001 Dracunculus medinensis DME_0001005001 N
GF23141 Drosophila ananassae FBgn0100135 N
GG16758 Drosophila erecta FBgn0108988 N
GH15872 Drosophila grimshawi FBgn0123343 N
osa Drosophila melanogaster FBgn0261885 N
GI23637 Drosophila mojavensis FBgn0146363 N
GA26236 Drosophila pseudoobscura FBgn0247610 N
GM15347 Drosophila sechellia FBgn0170267 N
GJ24712 Drosophila virilis FBgn0211788 N
GK22507 Drosophila willistoni FBgn0224484 N
osa Drosophila yakuba FBgn0041640 N
ECANG7_06547 Echinococcus canadensis ECANG7_06547 I
EmuJ_001157200 Echinococcus multilocularis EmuJ_001157200 I
EEL_0001008901 Elaeophora elaphi EEL_0001008901 N
EVEC_0000024601 Enterobius vermicularis EVEC_0000024601 N
D915_06741 Fasciola hepatica D915_06741 N
GL50803_17540 Giardia lamblia GL50803_17540 I
GPUH_0000112301 Gongylonema pulchrum GPUH_0000112301 N
HCOI00324200 Haemonchus contortus HCOI00324200 N
HPLM_0000291901 Haemonchus placei HPLM_0000291901 N
HHAL005964-PA Halyomorpha halys HHAL005964-PA N
Hsal_01939--XP_395512.3_APIME Harpegnathos saltator Hsal_01939--XP_395512.3_APIME N
HMEL002206 Heliconius melpomene HMEL002206 N
HPBE_0000983501 Heligmosomoides bakeri HPBE_0000983501 N
TTAC_0000915101 Hydatigera taeniaeformis TTAC_0000915101 I
HDID_0000342501 Hymenolepis diminuta HDID_0000342501 I
HmN_000451100 Hymenolepis microstoma HmN_000451100 I
HNAJ_0000082601 Hymenolepis nana HNAJ_0000082601 I
ISCW014189 Ixodes scapularis ISCW014189 I
LDEC011073 Leptinotarsa decemlineata LDEC011073 I
nLs.2.1.2.g09434 Litomosoides sigmodontis nLs.2.1.2.g09434 N
LCUP015823 Lucilia cuprina LCUP015823 N
LLOJ000864 Lutzomyia longipalpis LLOJ000864 N
MCOS_0000539101 Mesocestoides corti MCOS_0000539101 I
ML16136a Mnemiopsis leidyi ML16136a N
MDOA004559 Musca domestica MDOA004559 N
NV21537 Nasonia vitripennis NV21537 N
NECAME_01002 Necator americanus NECAME_01002 N
NBR_0002081701 Nippostrongylus brasiliensis NBR_0002081701 N
OESDEN_04600 Oesophagostomum dentatum OESDEN_04600 N
SNAPOd2T00006471001 Oikopleura dioica SNAPOd2T00006471001 I
OFLC_0001383401 Onchocerca flexuosa OFLC_0001383401 N
nOo.2.0.1.g08403 Onchocerca ochengi nOo.2.0.1.g08403 N
WBGene00237224 Onchocerca volvulus WBGene00237224 N
T265_07301 Opisthorchis viverrini T265_07301 N
PEQ_0000742201 Parascaris equorum PEQ_0000742201 N
PTRK_0001699800 Parastrongyloides trichosuri PTRK_0001699800 N
PHUM080380 Pediculus humanus PHUM080380 N
PPAI002183 Phlebotomus papatasi PPAI002183 N
scaffold2015-EXSNAP2012.2 Pristionchus exspectatus scaffold2015-EXSNAP2012.2 N
PPA05721 Pristionchus pacificus PPA05721 N
PXEA_0000852601 Protopolystoma xenopodis PXEA_0000852601 N
maker-pag1_scaffold_15-fgenesh-gene-1.10 Pythium aphanidermatum maker-pag1_scaffold_15-fgenesh-gene-1.10 N
RPRC005301 Rhodnius prolixus RPRC005301 N
Sakowv30017861m.g Saccoglossus kowalevskii Sakowv30017861m.g I
SSLN_0000405401 Schistocephalus solidus SSLN_0000405401 I
SCUD_0001703701 Schistosoma curassoni SCUD_0001703701 N
A_08377 Schistosoma haematobium A_08377 N
Sjc_0060650 Schistosoma japonicum Sjc_0060650 N
Smp_156170 Schistosoma mansoni Smp_156170 N
SMTD_0000055001 Schistosoma mattheei SMTD_0000055001 N
SMU15017366 Schmidtea mediterranea SMU15017366 N
SMU15033702 Schmidtea mediterranea SMU15033702 N
SBAD_0000668001 Soboliphyme baturini SBAD_0000668001 N
SINV22763 Solenopsis invicta SINV22763 N
L596_g4117 Steinernema carpocapsae L596_g4117 N
L889_g180 Steinernema feltiae L889_g180 N
L893_g29191 Steinernema glaseri L893_g29191 N
L898_g7337 Steinernema monticolum L898_g7337 N
L892_g19705 Steinernema scapterisci L892_g19705 N
SMAR003184 Strigamia maritima SMAR003184 I
SMAR006121 Strigamia maritima SMAR006121 I
SPU_023530 Strongylocentrotus purpuratus SPU_023530 I
SPAL_0001124500 Strongyloides papillosus SPAL_0001124500 N
SSTP_0000977600 Strongyloides stercoralis SSTP_0000977600 N
SVE_1830100 Strongyloides venezuelensis SVE_1830100 N
TsM_000529300 Taenia solium TsM_000529300 I
TELCIR_03263 Teladorsagia circumcincta TELCIR_03263 N
tetur02g14160 Tetranychus urticae tetur02g14160 N
tetur02g14180 Tetranychus urticae tetur02g14180 N
TCLT_0000619901 Thelazia callipaeda TCLT_0000619901 N
TCNE_0000128301 Toxocara canis TCNE_0000128301 N
TC013586 Tribolium castaneum TC013586 N
WUBG_00477 Wuchereria bancrofti WUBG_00477 N