CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Eucgr.F01991
(
Eucalyptus grandis
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
Eucgr.F01991
T334468_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Eucgr.F01991.1
Sox
134
201
PKSNRSGYNFFFAEHYARLKPQYYGRERAISKKIGYLWNNLTEAEKQVYQEKGVRDKERYKSEMQEYR
Eucgr.F01991.2
Sox
124
191
PKSNRSGYNFFFAEHYARLKPQYYGRERAISKKIGYLWNNLTEAEKQVYQEKGVRDKERYKSEMQEYR
Links
Other
Sox
family TFs
Other
Eucalyptus grandis
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMEG00000004960
Ailuropoda melanoleuca
ENSAMEG00000004960
I
ACOM031533
Anopheles coluzzii
ACOM031533
I
ENSBTAP00000049813-D1
Bos grunniens
ENSBTAP00000049813-D1
I
ENSCJAG00000021948
Callithrix jacchus
ENSCJAG00000021948
I
ENSCJAG00000031259
Callithrix jacchus
ENSCJAG00000031259
I
ENSCJAG00000032154
Callithrix jacchus
ENSCJAG00000032154
I
DUXA
Canis familiaris
ENSCAFG00000002431
I
ENSCSAG00000001657
Chlorocebus sabaeus
ENSCSAG00000001657
I
ENSDNOG00000049160
Dasypus novemcinctus
ENSDNOG00000049160
I
ENSDNOG00000025505
Dasypus novemcinctus
ENSDNOG00000025505
I
DUXA
Equus caballus
ENSECAG00000021112
I
DUXA
Felis catus
ENSFCAG00000007545
I
DUXA
Gorilla gorilla
ENSGGOG00000005650
I
DUXA
Homo sapiens
ENSG00000258873
D
DUXA
Loxodonta africana
ENSLAFG00000030167
I
ENSMMUP00000010232
Macaca fascicularis
ENSMMUP00000010232
I
DUXA
Macaca mulatta
ENSMMUG00000007788
I
DUXA
Microcebus murinus
ENSMICG00000006042
I
NEMVEDRAFT_v1g38792
Nematostella vectensis
NEMVEDRAFT_v1g38792
I
NEMVEDRAFT_v1g92436
Nematostella vectensis
NEMVEDRAFT_v1g92436
I
NEMVEDRAFT_v1g92500
Nematostella vectensis
NEMVEDRAFT_v1g92500
I
DUXA
Oryctolagus cuniculus
ENSOCUG00000011331
I
ENSOARG00000003446
Ovis aries
ENSOARG00000003446
I
DUXA
Pan troglodytes
ENSPTRG00000028871
I
ENSPANG00000009357
Papio anubis
ENSPANG00000009357
I
ENSPPYG00000010457
Pongo abelii
ENSPPYG00000010457
I
DUXA
Tursiops truncatus
ENSTTRG00000014200
I