AAH41216 (Xenopus laevis)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 AAH41216 T334747_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
AAH41216 Sox 48 116

Links

Other Sox family TFs
Other Xenopus laevis TFs

161 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_27911 Aegilops tauschii F775_27911 N 0.000
AMTR_s00057p00206860 Amborella trichopoda AMTR_s00057p00206860 N 0.000
Aquca_016_00289 Aquilegia coerulea Aquca_016_00289 N 0.000
fgenesh2_kg.1__941__AT1G09060.2 Arabidopsis lyrata fgenesh2_kg.1__941__AT1G09060.2 N 0.000
AT1G09060 Arabidopsis thaliana AT1G09060 N 0.000
Bostr.25219s0040 Boechera stricta Bostr.25219s0040 N 0.000
BRADI1G62640 Brachypodium distachyon BRADI1G62640 N 0.000
Bo8g058150 Brassica oleracea Bo8g058150 N 0.000
Bra030754 Brassica rapa Bra030754 N 0.000
PK22697.1 Cannabis sativa PK22697.1 N 0.000
Cagra.4395s0091 Capsella grandiflora Cagra.4395s0091 N 0.000
Carubv10011895m.g Capsella rubella Carubv10011895m.g N 0.000
evm.TU.supercontig_48.77 Carica papaya evm.TU.supercontig_48.77 N 0.000
Ca_03676 Cicer arietinum Ca_03676 N 0.000
Ciclev10000178m.g Citrus clementina Ciclev10000178m.g N 0.000
orange1.1g002177m.g Citrus sinensis orange1.1g002177m.g N 0.000
Cucsa.091190 Cucumis sativus Cucsa.091190 N 0.000
Eucgr.B01932 Eucalyptus grandis Eucgr.B01932 N 0.000
Thhalv10006723m.g Eutrema salsugineum Thhalv10006723m.g N 0.000
gene22503-v1.0-hybrid Fragaria vesca gene22503-v1.0-hybrid N 0.000
GLYMA10G29371 Glycine max GLYMA10G29371 N 0.000
GLYMA20G37910 Glycine max GLYMA20G37910 N 0.000
Gorai.004G240400 Gossypium raimondii Gorai.004G240400 N 0.000
MLOC_15207 Hordeum vulgare MLOC_15207 N 0.000
LPERR03G14970 Leersia perrieri LPERR03G14970 N 0.000
Lus10037812.g Linum usitatissimum Lus10037812.g N 0.000
Lus10017092.g Linum usitatissimum Lus10017092.g N 0.000
chr5.CM0299.460.nd Lotus japonicus chr5.CM0299.460.nd N 0.000
cassava22130.valid.m1 Manihot esculenta cassava22130.valid.m1 N 0.000
MTR_1g083120 Medicago truncatula MTR_1g083120 N 0.000
mgf016253m Mimulus guttatus mgf016253m N 0.000
ORGLA03G0163900 Oryza glaberrima ORGLA03G0163900 N 0.000
OGLUM03G17600 Oryza glumaepatula OGLUM03G17600 N 0.000
OMERI03G15300 Oryza meridionalis OMERI03G15300 N 0.000
ONIVA03G18210 Oryza nivara ONIVA03G18210 N 0.000
ORUFI03G17780 Oryza rufipogon ORUFI03G17780 N 0.000
OS03G0346700 Oryza sativa OS03G0346700 N 0.000
Pavir.J33002 Panicum virgatum Pavir.J33002 N 0.000
PDK_20s1361681g001 Phoenix dactylifera PDK_20s1361681g001 N 0.000
POPTR_0005s02710 Populus trichocarpa POPTR_0005s02710 N 0.000
POPTR_0013s01970 Populus trichocarpa POPTR_0013s01970 N 0.000
Pm003293 Prunus mume Pm003293 N 0.000
PRUPE_ppa020523mg Prunus persica PRUPE_ppa020523mg N 0.000
30128.m008807 Ricinus communis 30128.m008807 N 0.000
SapurV1A.0424s0260 Salix purpurea SapurV1A.0424s0260 N 0.000
Si034162m.g Setaria italica Si034162m.g N 0.000
Solyc02g078790.2 Solanum lycopersicum Solyc02g078790.2 N 0.000
PGSC0003DMG400022424 Solanum tuberosum PGSC0003DMG400022424 N 0.000
Sb01g035540 Sorghum bicolor Sb01g035540 N 0.000
TCM_026634 Theobroma cacao TCM_026634 N 0.000
Traes_4AS_93108583B Triticum aestivum Traes_4AS_93108583B N 0.000
Traes_4BS_BDBC1B1FA Triticum aestivum Traes_4BS_BDBC1B1FA N 0.000
Traes_4DL_E88B8B0F6 Triticum aestivum Traes_4DL_E88B8B0F6 N 0.000
TRIUR3_21153 Triticum urartu TRIUR3_21153 N 0.000
VIT_14s0060g02420 Vitis vinifera VIT_14s0060g02420 N 0.000
GRMZM2G428933 Zea mays GRMZM2G428933 N 0.000