CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CLEC003860
(
Cimex lectularius
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
CLEC003860
T334773_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU02819
M02490_2.00
Neurospora crassa
NNHNNNNNRN
NYNNNNNDNN
PBM
Weirauch et al.(2014)
pTH9672
0.548
0.493
For this family, TFs with SR scores >
0.415
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CLEC003860-PA
Sox
555
621
PKRAPSAYMLWFNDSREKIKADNPGISFTDIAKKGGELWKNLSDKSEWEKKAAKLKEEYTQAMSEYK
Links
Other
Sox
family TFs
Other
Cimex lectularius
TFs
268 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BAUCODRAFT_47223
Baudoinia compniacensis
BAUCODRAFT_47223
I
W97_02786
Coniosporium apollinis
W97_02786
I
DACRYDRAFT_114226
Dacryopinax sp
DACRYDRAFT_114226
I
GALMADRAFT_256803
Galerina marginata
GALMADRAFT_256803
I
SAPIO_CDS9713
Scedosporium apiospermum
SAPIO_CDS9713
I
SJAG_01740
Schizosaccharomyces japonicus
SJAG_01740
N
SOCG_04397
Schizosaccharomyces octosporus
SOCG_04397
I
K437DRAFT_34553
Tilletiaria anomala
K437DRAFT_34553
I