CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
LDEC020265
(
Leptinotarsa decemlineata
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
LDEC020265
T334907_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
LDEC020265-PA
Sox
269
334
IPRPANAFMIFANEWRKKLSVEHPGDNSKSISVKLGNLWKSLSSETRESYYSAARQAQLEHQLKYP
Links
Other
Sox
family TFs
Other
Leptinotarsa decemlineata
TFs
84 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AGABI2DRAFT_208468
Agaricus bisporus
AGABI2DRAFT_208468
N
0.430
M378DRAFT_9762
Amanita muscaria
M378DRAFT_9762
N
0.446
M378DRAFT_85535
Amanita muscaria
M378DRAFT_85535
I
0.426
M378DRAFT_124313
Amanita muscaria
M378DRAFT_124313
I
0.426
GB51010
Apis mellifera
GB51010
I
0.466
estExt_fgenesh2_pg.C_1670092
Branchiostoma floridae
estExt_fgenesh2_pg.C_1670092
I
0.419
CERSUDRAFT_118952
Ceriporiopsis subvermispora
CERSUDRAFT_118952
I
0.419
CC1G_07030
Coprinopsis cinerea
CC1G_07030
I
0.419
CC1G_08141
Coprinopsis cinerea
CC1G_08141
I
0.423
CC1G_03536
Coprinopsis cinerea
CC1G_03536
N
0.454
CC1G_04121
Coprinopsis cinerea
CC1G_04121
I
0.416
DACRYDRAFT_24732
Dacryopinax sp
DACRYDRAFT_24732
N
0.417
YQE_04749
Dendroctonus ponderosae
YQE_04749
N
0.419
DICSQDRAFT_32143
Dichomitus squalens
DICSQDRAFT_32143
I
0.445
DICSQDRAFT_40774
Dichomitus squalens
DICSQDRAFT_40774
I
0.424
FIBRA_03355
Fibroporia radiculosa
FIBRA_03355
I
0.434
FIBRA_06567
Fibroporia radiculosa
FIBRA_06567
I
0.419
FOMPIDRAFT_1149072
Fomitopsis pinicola
FOMPIDRAFT_1149072
I
0.419
GALMADRAFT_255628
Galerina marginata
GALMADRAFT_255628
N
0.423
GALMADRAFT_246110
Galerina marginata
GALMADRAFT_246110
I
0.422
hbp1
Gasterosteus aculeatus
ENSGACG00000010054
I
0.438
ENSGACG00000019192
Gasterosteus aculeatus
ENSGACG00000019192
I
0.438
GLOTRDRAFT_98119
Gloeophyllum trabeum
GLOTRDRAFT_98119
I
0.421
GLOTRDRAFT_66596
Gloeophyllum trabeum
GLOTRDRAFT_66596
N
0.424
GLOTRDRAFT_127199
Gloeophyllum trabeum
GLOTRDRAFT_127199
N
0.438
GYMLUDRAFT_48274
Gymnopus luxurians
GYMLUDRAFT_48274
I
0.418
HYDPIDRAFT_117889
Hydnomerulius pinastri
HYDPIDRAFT_117889
I
0.421
XP_002160058.1
Hydra magnipapillata
XP_002160058.1
I
0.438
HmN_000208300
Hymenolepis microstoma
HmN_000208300
I
0.436
HNAJ_0000300301
Hymenolepis nana
HNAJ_0000300301
I
0.436
JAAARDRAFT_182275
Jaapia argillacea
JAAARDRAFT_182275
I
0.424
JAAARDRAFT_209433
Jaapia argillacea
JAAARDRAFT_209433
I
0.426
K443DRAFT_94014
Laccaria amethystina
K443DRAFT_94014
N
0.425
K443DRAFT_679736
Laccaria amethystina
K443DRAFT_679736
I
0.416
K443DRAFT_11068
Laccaria amethystina
K443DRAFT_11068
N
0.432
LACBIDRAFT_293340
Laccaria bicolor
LACBIDRAFT_293340
N
0.418
LACBIDRAFT_317671
Laccaria bicolor
LACBIDRAFT_317671
N
0.432
MCOS_0000670801
Mesocestoides corti
MCOS_0000670801
I
0.424
Moror_4096
Moniliophthora roreri
Moror_4096
I
0.421
Moror_9549
Moniliophthora roreri
Moror_9549
I
0.416
fgenesh1_pg.scaffold_35000054
Monosiga brevicollis
fgenesh1_pg.scaffold_35000054
I
0.443
fgenesh1_pg.scaffold_41000062
Monosiga brevicollis
fgenesh1_pg.scaffold_41000062
I
0.453
fgeneshMC_pg.8_#_228
Mucor circinelloides
fgeneshMC_pg.8_#_228
I
0.420
fgeneshMC_pg.7_#_500
Mucor circinelloides
fgeneshMC_pg.7_#_500
I
0.420
NV14822
Nasonia vitripennis
NV14822
I
0.433
NEMVEDRAFT_v1g120503
Nematostella vectensis
NEMVEDRAFT_v1g120503
I
0.457
PTRK_0001068400
Parastrongyloides trichosuri
PTRK_0001068400
I
0.420
PAXINDRAFT_137714
Paxillus involutus
PAXINDRAFT_137714
I
0.427
PAXINDRAFT_171659
Paxillus involutus
PAXINDRAFT_171659
I
0.421
PAXRUDRAFT_826992
Paxillus rubicundulus
PAXRUDRAFT_826992
I
0.421
PHUM534240
Pediculus humanus
PHUM534240
I
0.465
PHUM605170
Pediculus humanus
PHUM605170
I
0.509
fgenesh1_pg.C_scaffold_14000043
Phanerochaete chrysosporium
fgenesh1_pg.C_scaffold_14000043
I
0.435
fgenesh1_pg.C_scaffold_7000437
Phanerochaete chrysosporium
fgenesh1_pg.C_scaffold_7000437
I
0.430
PHLGIDRAFT_44459
Phlebiopsis gigantea
PHLGIDRAFT_44459
I
0.441
PILCRDRAFT_818026
Piloderma croceum
PILCRDRAFT_818026
I
0.417
PILCRDRAFT_92345
Piloderma croceum
PILCRDRAFT_92345
I
0.417
PISMIDRAFT_681650
Pisolithus microcarpus
PISMIDRAFT_681650
I
0.421
M404DRAFT_1003113
Pisolithus tinctorius
M404DRAFT_1003113
I
0.421
PLEOSDRAFT_1034535
Pleurotus ostreatus
PLEOSDRAFT_1034535
I
0.417
POSPLDRAFT_98643
Postia placenta
POSPLDRAFT_98643
I
0.417
POSPLDRAFT_103748
Postia placenta
POSPLDRAFT_103748
I
0.417
GLOINDRAFT_30433
Rhizophagus irregularis
GLOINDRAFT_30433
N
0.433
SCHCODRAFT_230584
Schizophyllum commune
SCHCODRAFT_230584
I
0.436
SCLCIDRAFT_26935
Scleroderma citrinum
SCLCIDRAFT_26935
I
0.421
SCLCIDRAFT_81131
Scleroderma citrinum
SCLCIDRAFT_81131
I
0.436
SERLA73DRAFT_69833
Serpula lacrymans
SERLA73DRAFT_69833
I
0.419
M422DRAFT_89750
Sphaerobolus stellatus
M422DRAFT_89750
I
0.428
M422DRAFT_89155
Sphaerobolus stellatus
M422DRAFT_89155
I
0.452
SPPG_01987
Spizellomyces punctatus
SPPG_01987
I
0.422
SMAR001063
Strigamia maritima
SMAR001063
I
0.448
CY34DRAFT_811615
Suillus luteus
CY34DRAFT_811615
N
0.416
CY34DRAFT_807072
Suillus luteus
CY34DRAFT_807072
I
0.421
CY34DRAFT_31998
Suillus luteus
CY34DRAFT_31998
I
0.439
ENSTRUG00000011881
Takifugu rubripes
ENSTRUG00000011881
I
0.419
BN946_scf184844.g22
Trametes cinnabarina
BN946_scf184844.g22
I
0.419
BN946_scf184829.g29
Trametes cinnabarina
BN946_scf184829.g29
I
0.457
TC007345
Tribolium castaneum
TC007345
I
0.481
TriadG55419
Trichoplax adhaerens
TriadG55419
I
0.464
L798_14304
Zootermopsis nevadensis
L798_14304
I
0.445
L798_09327
Zootermopsis nevadensis
L798_09327
I
0.471
ZBAI_05541
Zygosaccharomyces bailii
ZBAI_05541
I
0.432
ZBAI_00389
Zygosaccharomyces bailii
ZBAI_00389
I
0.432
ZYRO0C16214g
Zygosaccharomyces rouxii
ZYRO0C16214g
I
0.426