CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
SMU15016767
(
Schmidtea mediterranea
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
SMU15016767
T335014_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SMU15016767
Sox
10
80
PKGAMSAYACFVQVIREKYKNKHPDEAVVFSEFSKKCAEKWRQLGPKEKKQFEDMAAVDKARYIKEMNEYV
SMU15016767
Sox
99
165
PKRGLSAFFLYSQEFRGQIKDEHPDWRVGDIAKELGKRWETCADKGKYEELARREKERFEREMDEYK
Links
Other
Sox
family TFs
Other
Schmidtea mediterranea
TFs
195 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMEG00000017837
Ailuropoda melanoleuca
ENSAMEG00000017837
I
ENSAPLG00000016376
Anas platyrhynchos
ENSAPLG00000016376
N
ENSP00000301727-D1
Bos grunniens
ENSP00000301727-D1
I
E4F1
Bos taurus
ENSBTAG00000009961
I
E4F1
Callithrix jacchus
ENSCJAG00000015000
I
E4F1
Cavia porcellus
ENSCPOG00000002052
I
ENSCSAG00000010850
Chlorocebus sabaeus
ENSCSAG00000010850
I
E4F1
Dasypus novemcinctus
ENSDNOG00000016503
I
E4f1
Dipodomys ordii
ENSDORG00000001751
I
E4F1
Equus caballus
ENSECAG00000008036
I
E4F1
Gorilla gorilla
ENSGGOG00000014241
I
E4F1
Homo sapiens
ENSG00000167967
D
ENSSTOG00000013171
Ictidomys tridecemlineatus
ENSSTOG00000013171
I
E4F1
Loxodonta africana
ENSLAFG00000000725
I
ENSP00000301727
Macaca fascicularis
ENSP00000301727
I
E4F1
Macaca mulatta
ENSMMUG00000019235
I
E4F1
Microcebus murinus
ENSMICG00000005892
I
ENSMPUG00000015378
Mustela putorius furo
ENSMPUG00000015378
I
E4f1
Mus musculus
ENSMUSG00000024137
D
Myotis_brandtii_E4f1_10005619
Myotis brandtii
Myotis_brandtii_E4f1_10005619
I
E4F1
Myotis lucifugus
ENSMLUG00000016786
I
ENSNLEG00000009261
Nomascus leucogenys
ENSNLEG00000009261
I
E4F1
Ochotona princeps
ENSOPRG00000002573
I
E4F1
Oryctolagus cuniculus
ENSOCUG00000025484
I
E4F1
Otolemur garnettii
ENSOGAG00000006594
I
ENSOARG00000017910
Ovis aries
ENSOARG00000017910
I
ENSPANG00000017016
Papio anubis
ENSPANG00000017016
I
ENSPPYG00000006994
Pongo abelii
ENSPPYG00000006994
N
E4F1
Procavia capensis
ENSPCAG00000004337
I
E4F1
Pteropus vampyrus
ENSPVAG00000005098
I
E4f1
Rattus norvegicus
ENSRNOG00000009224
I
E4F1
Sus scrofa
ENSSSCG00000008047
I
E4F1
Tursiops truncatus
ENSTTRG00000008208
I