CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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XP_002490100.1
(
Pichia pastoris
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
XP_002490100.1
T335360_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
XP_002490100.1
Sox
125
149
PKRPTNAYLIFCDLEKDKIRKSLQH
XP_002490100.1
Sox
157
205
GEGVHKGNIDLSRGLSDAWKLLDEESRKPYYALYEEDRRRYQRELKEYQ
Links
Other
Sox
family TFs
Other
Pichia pastoris
TFs
44 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GLOTRDRAFT_137651
Gloeophyllum trabeum
GLOTRDRAFT_137651
N
PIIN_00063
Piriformospora indica
PIIN_00063
N
PaG_02922
Pseudozyma aphidis
PaG_02922
I
sr10662
Sporisorium reilianum
sr10662
I
UHOR_02856
Ustilago hordei
UHOR_02856
N
UM01925
Ustilago maydis
UM01925
I