CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HCOI01913400
(
Haemonchus contortus
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
HCOI01913400
T336408_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HCOI01913400.t1
Sox
10
74
RGKTSPYGFFVKMCYEEHKKKYPNENVQVTEISKKCSEKWKTMSDDEKRRFYELAQKDAERYQAE
Links
Other
Sox
family TFs
Other
Haemonchus contortus
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
scaffold_603155.1
Arabidopsis lyrata
scaffold_603155.1
N
SCL26
Arabidopsis thaliana
AT4G08250
N
Bostr.3877s0035
Boechera stricta
Bostr.3877s0035
N
Bo9g120770
Brassica oleracea
Bo9g120770
N
Bra002894
Brassica rapa
Bra002894
N
Carubv10003692m.g
Capsella rubella
Carubv10003692m.g
N
Thhalv10028622m.g
Eutrema salsugineum
Thhalv10028622m.g
N