CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bo9g120770
(
Brassica oleracea
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
Bo9g120770
T199964_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bo9g120770.1
GRAS
118
487
LVHLLVAAADASIGADKTRELTRVLLAKLKDMTSTNDRTNMERLAAHFTNGLSKLHKEANVQRQYGPHQHPDVHDRVDVMLAFQMLQNMSPYINFGYLTATQAILEAVQYERRIHIVDYDITDGVQWPSLMQALVSRNTGPSAQHLRITALSRATNGKKSVAAVQEAGRRLTAFAESIGQPFSYHHCRMESDTFNPSSLKLVRGEAVVINCVLHLPRFSHQPPNSIISFLSEAKTLNPKLVTLVHEEVGLVGNQGFLYRFMDLLHQFSAIFDSLEAGPARGFVERVIFGPWVSDWLTRIAITAEVESFASWPLWLATNGFKPVEVSFANRCQAKLLLSLFNDGYGVEELGQNGLVLGWKSRRLVSASFWA
Links
Other
GRAS
family TFs
Other
Brassica oleracea
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bra002894
Brassica rapa
Bra002894
N
0.992
scaffold_603155.1
Arabidopsis lyrata
scaffold_603155.1
N
0.819
Bostr.3877s0035
Boechera stricta
Bostr.3877s0035
N
0.814
SCL26
Arabidopsis thaliana
AT4G08250
N
0.812
Cagra.0196s0006
Capsella grandiflora
Cagra.0196s0006
N
0.808
Carubv10003692m.g
Capsella rubella
Carubv10003692m.g
N
0.806
Thhalv10028622m.g
Eutrema salsugineum
Thhalv10028622m.g
N
0.804