CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HDID_0000279401
(
Hymenolepis diminuta
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
HDID_0000279401
T336416_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HDID_0000279401-mRNA-1
Sox
164
220
EKRFKSAYLAYVEKMMPILKEENPGMRHSQLNDKIYKMFQNAPENPRNQTHSKYNEK
Links
Other
Sox
family TFs
Other
Hymenolepis diminuta
TFs
20 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CLEC000086
Cimex lectularius
CLEC000086
N
0.429
CLEC002888
Cimex lectularius
CLEC002888
N
0.440
DILT_0001250601
Diphyllobothrium latum
DILT_0001250601
N
0.472
EmuJ_000938500
Echinococcus multilocularis
EmuJ_000938500
N
0.504
EmuJ_000916900
Echinococcus multilocularis
EmuJ_000916900
N
0.504
ECPE_0001800901
Echinostoma caproni
ECPE_0001800901
N
0.478
HNAJ_0000101901
Hymenolepis nana
HNAJ_0000101901
N
0.675
ISCW011313
Ixodes scapularis
ISCW011313
N
0.420
T265_00523
Opisthorchis viverrini
T265_00523
N
0.458
ccdc124
Oryzias latipes
ENSORLG00000015728
N
0.415
A_06553
Schistosoma haematobium
A_06553
N
0.487
Sjc_0011880
Schistosoma japonicum
Sjc_0011880
N
0.474
Smp_004360
Schistosoma mansoni
Smp_004360
N
0.487
SMRZ_0002114501
Schistosoma margrebowiei
SMRZ_0002114501
N
0.481
SMU15012775
Schmidtea mediterranea
SMU15012775
N
0.455
SPU_001776
Strongylocentrotus purpuratus
SPU_001776
N
0.429
TASK_0000467701
Taenia asiatica
TASK_0000467701
N
0.504
TsM_000545400
Taenia solium
TsM_000545400
N
0.504
TRE_0001918901
Trichobilharzia regenti
TRE_0001918901
N
0.480
TTRE_0000309701
Trichuris trichiura
TTRE_0000309701
N
0.421