CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
T265_00523
(
Opisthorchis viverrini
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
T265_00523
T337091_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
T265_00523
Sox
240
298
RRLKAAYSAYEEKMLPILREENPGLRISQLKQMIFKKFQTAPENPKNQIHSSYNAGRQQ
Links
Other
Sox
family TFs
Other
Opisthorchis viverrini
TFs
54 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ECPE_0001800901
Echinostoma caproni
ECPE_0001800901
N
0.643
DILT_0001250601
Diphyllobothrium latum
DILT_0001250601
N
0.630
SMU15012775
Schmidtea mediterranea
SMU15012775
N
0.556
Smp_004360
Schistosoma mansoni
Smp_004360
N
0.550
A_06553
Schistosoma haematobium
A_06553
N
0.550
SMRZ_0002114501
Schistosoma margrebowiei
SMRZ_0002114501
N
0.544
EmuJ_000916900
Echinococcus multilocularis
EmuJ_000916900
N
0.543
EmuJ_000938500
Echinococcus multilocularis
EmuJ_000938500
N
0.543
TASK_0000467701
Taenia asiatica
TASK_0000467701
N
0.543
TRE_0001918901
Trichobilharzia regenti
TRE_0001918901
N
0.543
TsM_000545400
Taenia solium
TsM_000545400
N
0.543
Sjc_0011880
Schistosoma japonicum
Sjc_0011880
N
0.537
CLEC002888
Cimex lectularius
CLEC002888
N
0.517
SPU_001776
Strongylocentrotus purpuratus
SPU_001776
N
0.491
ISCW011313
Ixodes scapularis
ISCW011313
N
0.483
HNAJ_0000101901
Hymenolepis nana
HNAJ_0000101901
N
0.483
PHUM036320
Pediculus humanus
PHUM036320
N
0.472
CapteG224864
Capitella teleta
CapteG224864
I
0.466
HelroG66455
Helobdella robusta
HelroG66455
N
0.459
HDID_0000279401
Hymenolepis diminuta
HDID_0000279401
N
0.458
estExt_fgenesh2_pg.C_1070085
Branchiostoma floridae
estExt_fgenesh2_pg.C_1070085
N
0.453
estExt_fgenesh2_pm.C_3240002
Branchiostoma floridae
estExt_fgenesh2_pm.C_3240002
N
0.453
AGAP004110
Anopheles gambiae
AGAP004110
N
0.452
AARA009694
Anopheles arabiensis
AARA009694
N
0.452
ACHR002403
Anopheles christyi
ACHR002403
N
0.452
ACOM033320
Anopheles coluzzii
ACOM033320
N
0.452
ACUA003510
Anopheles culicifacies
ACUA003510
N
0.452
AEPI008570
Anopheles epiroticus
AEPI008570
N
0.452
AMEM002948
Anopheles merus
AMEM002948
N
0.452
AQUA009805
Anopheles quadriannulatus
AQUA009805
N
0.452
ASIS023527
Anopheles sinensis
ASIS023527
N
0.452
ASTEI04275
Anopheles stephensi
ASTEI04275
N
0.452
ACYPI003297
Acyrthosiphon pisum
ACYPI003297
I
0.450
AMEC005071
Anopheles melas
AMEC005071
N
0.445
KGM_20190
Danaus plexippus
KGM_20190
I
0.443
MCINX012524
Melitaea cinxia
MCINX012524
I
0.437
tetur18g00680
Tetranychus urticae
tetur18g00680
I
0.437
ANCCAN_29654
Ancylostoma caninum
ANCCAN_29654
N
0.436
ANCCEY_08672
Ancylostoma ceylanicum
ANCCEY_08672
N
0.436
HHAL005242-PA
Halyomorpha halys
HHAL005242-PA
I
0.433
NBR_0000605501
Nippostrongylus brasiliensis
NBR_0000605501
N
0.433
NV13812
Nasonia vitripennis
NV13812
I
0.432
CBN09380
Caenorhabditis brenneri
CBN09380
N
0.426
CJA05209
Caenorhabditis japonica
CJA05209
N
0.426
CRE03905
Caenorhabditis remanei
CRE03905
N
0.426
CGI_10019404
Crassostrea gigas
CGI_10019404
N
0.421
Cflo_06133--XP_394373.1_APIME
Camponotus floridanus
Cflo_06133--XP_394373.1_APIME
I
0.421
ADAC009894
Anopheles darlingi
ADAC009894
N
0.420
AALB007196
Anopheles albimanus
AALB007196
N
0.420
AATE006267
Anopheles atroparvus
AATE006267
N
0.420
ADIR002941
Anopheles dirus
ADIR002941
N
0.420
AFAF018499
Anopheles farauti
AFAF018499
N
0.420
AFUN011346
Anopheles funestus
AFUN011346
N
0.420
AMIN003838
Anopheles minimus
AMIN003838
N
0.420