L596_g21045 (Steinernema carpocapsae)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 L596_g21045 T336494_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NCU02819
M02490_2.00 		Neurospora crassa
NNHNNNNNRN
NYNNNNNDNN		 PBM
Weirauch et al.(2014)
pTH9672 		0.421 0.299
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
L596_g21045.t1 Sox 129 196

Links

Other Sox family TFs
Other Steinernema carpocapsae TFs

165 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PK03169.1 Cannabis sativa PK03169.1 N 0.000
PK04625.1 Cannabis sativa PK04625.1 N 0.000
PK25954.1 Cannabis sativa PK25954.1 N 0.000
Carubv10000015m.g Capsella rubella Carubv10000015m.g N 0.000
Eucgr.G02321 Eucalyptus grandis Eucgr.G02321 N 0.000
Gorai.006G061200 Gossypium raimondii Gorai.006G061200 N 0.000
MDP0000233303 Malus domestica MDP0000233303 N 0.000
MTR_7g007010 Medicago truncatula MTR_7g007010 N 0.000
OB01G27020 Oryza brachyantha OB01G27020 N 0.000
OLONG_008015 Oryza longistaminata OLONG_008015 N 0.000
Pm029059 Prunus mume Pm029059 N 0.000
Traes_4BL_D44ACD58E Triticum aestivum Traes_4BL_D44ACD58E N 0.000