CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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nAv.1.0.1.g09220
(
Acanthocheilonema viteae
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
nAv.1.0.1.g09220
T336645_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
nAv.1.0.1.t09220-RA
Sox
35
100
KKRSSNGFMYFADARRAFYTAENKGMHLTAKKLVERATRDWKLMSEEERHKWRSESSRRHDEIPRR
Links
Other
Sox
family TFs
Other
Acanthocheilonema viteae
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ALUE_0001936401
Ascaris lumbricoides
ALUE_0001936401
N
ASU_12809
Ascaris suum
ASU_12809
N
Bm6751
Brugia malayi
Bm6751
N
BTMF_0000069401
Brugia timori
BTMF_0000069401
N
BXY_1758300
Bursaphelenchus xylophilus
BXY_1758300
N
nDi.2.2.2.g08383
Dirofilaria immitis
nDi.2.2.2.g08383
N
DME_0000089401
Dracunculus medinensis
DME_0000089401
I
WBGene00246765
Onchocerca volvulus
WBGene00246765
N
L596_g3695
Steinernema carpocapsae
L596_g3695
N
L893_g18186
Steinernema glaseri
L893_g18186
N
L898_g139
Steinernema monticolum
L898_g139
N
L892_g4460
Steinernema scapterisci
L892_g4460
N
SMUV_0000808801
Syphacia muris
SMUV_0000808801
I
TCLT_0000932101
Thelazia callipaeda
TCLT_0000932101
N
TCNE_0001371701
Toxocara canis
TCNE_0001371701
N