CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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nAv.1.0.1.g09220
(
Acanthocheilonema viteae
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
nAv.1.0.1.g09220
T336645_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
nAv.1.0.1.t09220-RA
Sox
35
100
KKRSSNGFMYFADARRAFYTAENKGMHLTAKKLVERATRDWKLMSEEERHKWRSESSRRHDEIPRR
Links
Other
Sox
family TFs
Other
Acanthocheilonema viteae
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
WUBG_12231
Wuchereria bancrofti
WUBG_12231
N
0.661
LOAG_10530
Loa loa
LOAG_10530
N
0.661
nLs.2.1.2.g07623
Litomosoides sigmodontis
nLs.2.1.2.g07623
N
0.626
Bm8815
Brugia malayi
Bm8815
N
0.602
WBGene00249373
Onchocerca volvulus
WBGene00249373
N
0.594
nDi.2.2.2.g09932
Dirofilaria immitis
nDi.2.2.2.g09932
N
0.594
nOo.2.0.1.g08720
Onchocerca ochengi
nOo.2.0.1.g08720
N
0.594
TCLT_0000719801
Thelazia callipaeda
TCLT_0000719801
N
0.536
ASIM_0000454201
Anisakis simplex
ASIM_0000454201
N
0.465
ALUE_0000998001
Ascaris lumbricoides
ALUE_0000998001
N
0.443
ASU_09388
Ascaris suum
ASU_09388
N
0.443
TMUE_s0109000700
Trichuris muris
TMUE_s0109000700
N
0.424
PEQ_0000634001
Parascaris equorum
PEQ_0000634001
N
0.418