CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OESDEN_15244
(
Oesophagostomum dentatum
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
OESDEN_15244
T336783_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OESDEN_15244
Sox
10
74
RGKTSPYGFFVKMCYEEHKKKYPNENVQVTEISKKCSEKWKTMSDDEKRRFYELAQKDAERYQAE
Links
Other
Sox
family TFs
Other
Oesophagostomum dentatum
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BTMF_0000256101
Brugia timori
BTMF_0000256101
N
0.640
hmgb2a
Danio rerio
ENSDARG00000029722
N
0.422
GPLIN_001135700
Globodera pallida
GPLIN_001135700
N
0.561
HCOI01912700
Haemonchus contortus
HCOI01912700
N
0.741
HCOI01913400
Haemonchus contortus
HCOI01913400
N
0.741
HelroG72245
Helobdella robusta
HelroG72245
N
0.458
ENSOANG00000000353
Ornithorhynchus anatinus
ENSOANG00000000353
N
0.424
SMAR010283
Strigamia maritima
SMAR010283
N
0.447
SVUK_0000870501
Strongylus vulgaris
SVUK_0000870501
N
0.596