CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SVUK_0000870501
(
Strongylus vulgaris
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
SVUK_0000870501
T337081_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SVUK_0000870501-mRNA-1
Sox
89
130
RGKTSPYGFFVKMCYEEHKKKYPNENVQVTEISKKCSEKWKV
Links
Other
Sox
family TFs
Other
Strongylus vulgaris
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GPLIN_001135700
Globodera pallida
GPLIN_001135700
N
0.707
HCOI01912700
Haemonchus contortus
HCOI01912700
N
0.596
HCOI01913400
Haemonchus contortus
HCOI01913400
N
0.596
OESDEN_15244
Oesophagostomum dentatum
OESDEN_15244
N
0.596
ASTEI08849
Anopheles stephensi
ASTEI08849
N
0.506
HMGB1
Ornithorhynchus anatinus
ENSOANG00000011494
N
0.496
BTMF_0000256101
Brugia timori
BTMF_0000256101
N
0.494