CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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STAT5B
(
Sus scrofa
)
STAT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02864 (STAT_bind)
IPR013801
ENSSSCG00000017406
T337674_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
STAT5B
M09417_2.00
Homo sapiens
NNTTCYMRGAAN
NTTCYKRGAANN
Misc
Kulakovskiy et al.(2013)
STA5B_HUMAN.H11MO.0.A
0.988
0.988
STAT5B
M11371_2.00
Homo sapiens
NDWTTCYNGGAAWHN
NDWTTCCNRGAAWHN
Transfac
Matys et al.(2006)
V$STAT5B_01
0.988
0.988
Stat5b
M09421_2.00
Mus musculus
NNTTCYMRGAAN
NTTCYKRGAANN
Misc
Kulakovskiy et al.(2013)
STA5B_MOUSE.H11MO.0.A
0.979
0.979
Stat5a
M09420_2.00
Mus musculus
TTCYMRGAAN
NTTCYKRGAA
Misc
Kulakovskiy et al.(2013)
STA5A_MOUSE.H11MO.0.A
0.959
0.959
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSSSCP00000018443
STAT
332
582
FIIEKQPPQVLKTQTKFAATVRLLVGGKLNVHMNPPQVKATIISEQQAKSLLKNESTRNDYSGEILNNCCVMEYHQATGTLSAHFRNMSLKRIKRSDRRGAESVTEEKFTILFESQFSVGGNELVFQVKTLSLPVVVIVHGSQDNNATATVLWDNAFAEPGRVPFAVPDKVLWPQLCEALNMKFKAEVQSNRGLTKENLVFLAQKLFNSSSSHLEDYSGMSVSWSQFNRENLPGRNYTFWQWFDGVMEVLK
Links
Other
STAT
family TFs
Other
Sus scrofa
TFs
104 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AMTR_s00025p00072580
Amborella trichopoda
AMTR_s00025p00072580
I
0.000
Aquca_043_00021
Aquilegia coerulea
Aquca_043_00021
I
0.000
scaffold_401930.1
Arabidopsis lyrata
scaffold_401930.1
I
0.000
ASR3
Arabidopsis thaliana
AT2G33550
D
0.000
Bostr.23794s0746
Boechera stricta
Bostr.23794s0746
I
0.000
Bo4g043600
Brassica oleracea
Bo4g043600
I
0.000
Bo4g182020
Brassica oleracea
Bo4g182020
I
0.000
Bra005486
Brassica rapa
Bra005486
I
0.000
Bra021860
Brassica rapa
Bra021860
I
0.000
Carubv10023675m.g
Capsella rubella
Carubv10023675m.g
I
0.000
evm.TU.supercontig_2461.1
Carica papaya
evm.TU.supercontig_2461.1
I
0.000
Cla001502
Citrullus lanatus
Cla001502
I
0.000
Ciclev10033491m.g
Citrus clementina
Ciclev10033491m.g
I
0.000
Ciclev10005329m.g
Citrus clementina
Ciclev10005329m.g
I
0.000
orange1.1g019057m.g
Citrus sinensis
orange1.1g019057m.g
I
0.000
Cucsa.349220
Cucumis sativus
Cucsa.349220
I
0.000
Eucgr.B03553
Eucalyptus grandis
Eucgr.B03553
I
0.000
Thhalv10016974m.g
Eutrema salsugineum
Thhalv10016974m.g
I
0.000
Gorai.002G021600
Gossypium raimondii
Gorai.002G021600
I
0.000
cassava40545.m1
Manihot esculenta
cassava40545.m1
I
0.000
cassava13649.valid.m1
Manihot esculenta
cassava13649.valid.m1
I
0.000
cassava12909.valid.m1
Manihot esculenta
cassava12909.valid.m1
I
0.000
mgf009760m
Mimulus guttatus
mgf009760m
I
0.000
POPTR_0003s16150
Populus trichocarpa
POPTR_0003s16150
I
0.000
POPTR_0001s13060
Populus trichocarpa
POPTR_0001s13060
I
0.000
Pm024597
Prunus mume
Pm024597
I
0.000
30128.m008552
Ricinus communis
30128.m008552
I
0.000
SapurV1A.0499s0110
Salix purpurea
SapurV1A.0499s0110
I
0.000
SapurV1A.2674s0010
Salix purpurea
SapurV1A.2674s0010
I
0.000
Solyc04g045430.2
Solanum lycopersicum
Solyc04g045430.2
I
0.000
VIT_01s0150g00050
Vitis vinifera
VIT_01s0150g00050
I
0.000