Alligator_sinensis_CCG021133.1 (Alligator sinensis)
STAT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02864 (STAT_bind) IPR013801 Alligator_sinensis_CCG021133.1 T337809_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
STAT3
M08172_2.00 		Homo sapiens
HTTCCHRGMAV
BTKCYDGGAAD		 ChIP-seq
Mathelier et al.(2014)
MA0144.2 		1.000 1.000
STAT3
M08015_2.00 		Homo sapiens
YDTTTMYYRGAARHSABVDB
VHBVTSDYTTCYRRKAAAHR		 ChIP-seq
Gerstein et al.(2012)
GM12878_STAT3_Stanford 		1.000 1.000
STAT3
M08016_2.00 		Homo sapiens
NNNTTCCHRKAAN
NTTMYDGGAANNN		 ChIP-seq
Gerstein et al.(2012)
HeLa-S3_STAT3_Stanford 		1.000 1.000
STAT3
M08017_2.00 		Homo sapiens
NNHTTCCYRKMANNN
NNNTKMYRGGAADNN		 ChIP-seq
Gerstein et al.(2012)
MCF10A-Er-Src_STAT3_Harvard#Weissman 		1.000 1.000
STAT3
M08018_2.00 		Homo sapiens
NNHTTCCYRKMANNN
NNNTKMYRGGAADNN		 ChIP-seq
Gerstein et al.(2012)
MCF10A-Er-Src_STAT3_Stanford 		1.000 1.000
Stat3
M08043_2.00 		Mus musculus
BTTCCYRGMAD
HTKCYRGGAAV		 ChIP-seq
Chen et al.(2011)
SRP000217_Stat3 		1.000 1.000
STAT3
M09415_2.00 		Homo sapiens
NNYTTCCMRGAA
TTCYKGGAARNN		 Misc
Kulakovskiy et al.(2013)
STAT3_HUMAN.H11MO.0.A 		1.000 1.000
Stat3
M09419_2.00 		Mus musculus
NNYTTMCHRKMA
TKMYDGKAARNN		 Misc
Kulakovskiy et al.(2013)
STAT3_MOUSE.H11MO.0.A 		1.000 1.000
Stat3
M09645_2.00 		Mus musculus
NNBTTCCNGGAAVN
NBTTCCNGGAAVNN		 Misc
Heinz et al.(2010)
CD4-Stat3_GSE19198 		1.000 1.000
STAT3
M11367_2.00 		Homo sapiens
NBBBATTTCCSGGAARTGNNN
NNNCAYTTCCSGGAAATVVVN		 Transfac
Matys et al.(2006)
V$STAT3_01 		1.000 1.000
STAT3
M11368_2.00 		Homo sapiens
NNNTTCCN
NGGAANNN		 Transfac
Matys et al.(2006)
V$STAT3_02 		1.000 1.000
STAT3
M11369_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$STAT3_03 		1.000 1.000
STAT3
M11370_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$STAT3_Q4 		1.000 1.000
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Alligator_sinensis_CCG021133.1 STAT 321 573

Links

Other STAT family TFs
Other Alligator sinensis TFs

65 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_13455 Aegilops tauschii F775_13455 N 0.000
F775_19761 Aegilops tauschii F775_19761 N 0.000
Aquca_005_00168 Aquilegia coerulea Aquca_005_00168 N 0.000
anac090 Arabidopsis lyrata fgenesh2_kg.6__2228__AT5G22380.1 N 0.000
NAC090 Arabidopsis thaliana AT5G22380 N 0.000
BRADI2G55780 Brachypodium distachyon BRADI2G55780 N 0.000
Bo2g023870 Brassica oleracea Bo2g023870 N 0.000
Bo9g148540 Brassica oleracea Bo9g148540 N 0.000
Bra002408 Brassica rapa Bra002408 N 0.000
Bra020188 Brassica rapa Bra020188 N 0.000
Ca_00818 Cicer arietinum Ca_00818 N 0.000
Cla018691 Citrullus lanatus Cla018691 N 0.000
Ciclev10029032m.g Citrus clementina Ciclev10029032m.g N 0.000
orange1.1g023996m.g Citrus sinensis orange1.1g023996m.g N 0.000
Cucsa.083530 Cucumis sativus Cucsa.083530 N 0.000
Thhalv10014563m.g Eutrema salsugineum Thhalv10014563m.g N 0.000
GLYMA19G38211 Glycine max GLYMA19G38211 N 0.000
GLYMA03G35570 Glycine max GLYMA03G35570 N 0.000
Gorai.001G122800 Gossypium raimondii Gorai.001G122800 N 0.000
Gorai.002G238300 Gossypium raimondii Gorai.002G238300 N 0.000
MLOC_60153 Hordeum vulgare MLOC_60153 N 0.000
MLOC_7757 Hordeum vulgare MLOC_7757 N 0.000
LPERR01G32790 Leersia perrieri LPERR01G32790 N 0.000
LPERR05G14390 Leersia perrieri LPERR05G14390 N 0.000
LPERR11G02950 Leersia perrieri LPERR11G02950 N 0.000
LPERR12G03220 Leersia perrieri LPERR12G03220 N 0.000
Lus10004846.g Linum usitatissimum Lus10004846.g N 0.000
Lus10020643.g Linum usitatissimum Lus10020643.g N 0.000
MDP0000759504 Malus domestica MDP0000759504 N 0.000
MDP0000205938 Malus domestica MDP0000205938 N 0.000
MDP0000130797 Malus domestica MDP0000130797 N 0.000
cassava32867.m1 Manihot esculenta cassava32867.m1 N 0.000
cassava14235.m1 Manihot esculenta cassava14235.m1 N 0.000
MTR_7g105170 Medicago truncatula MTR_7g105170 N 0.000
GSMUA_Achr10G04720_001 Musa acuminata GSMUA_Achr10G04720_001 N 0.000
GSMUA_Achr9G29750_001 Musa acuminata GSMUA_Achr9G29750_001 N 0.000
GSMUA_Achr8G01410_001 Musa acuminata GSMUA_Achr8G01410_001 N 0.000
GSMUA_Achr6G19400_001 Musa acuminata GSMUA_Achr6G19400_001 N 0.000
OBART12G03440 Oryza barthii OBART12G03440 N 0.000
OBART11G03530 Oryza barthii OBART11G03530 N 0.000
OBART01G38190 Oryza barthii OBART01G38190 N 0.000
OB12G13350 Oryza brachyantha OB12G13350 N 0.000
OB05G26010 Oryza brachyantha OB05G26010 N 0.000
ORGLA12G0180300 Oryza glaberrima ORGLA12G0180300 N 0.000
ORGLA12G0033100 Oryza glaberrima ORGLA12G0033100 N 0.000
ORGLA11G0032800 Oryza glaberrima ORGLA11G0032800 N 0.000
ORGLA01G0320200 Oryza glaberrima ORGLA01G0320200 N 0.000
OGLUM01G42380 Oryza glumaepatula OGLUM01G42380 N 0.000
OGLUM03G09050 Oryza glumaepatula OGLUM03G09050 N 0.000
OGLUM11G03170 Oryza glumaepatula OGLUM11G03170 N 0.000
OGLUM12G04110 Oryza glumaepatula OGLUM12G04110 N 0.000
BGIOSGA004848 Oryza indica BGIOSGA004848 N 0.000
BGIOSGA034823 Oryza indica BGIOSGA034823 N 0.000
BGIOSGA037019 Oryza indica BGIOSGA037019 N 0.000
OMERI01G35090 Oryza meridionalis OMERI01G35090 N 0.000
OMERI11G03230 Oryza meridionalis OMERI11G03230 N 0.000
ONIVA01G42870 Oryza nivara ONIVA01G42870 N 0.000
ONIVA06G01110 Oryza nivara ONIVA06G01110 N 0.000
ONIVA11G03690 Oryza nivara ONIVA11G03690 N 0.000
ONIVA12G03060 Oryza nivara ONIVA12G03060 N 0.000
OPUNC11G03220 Oryza punctata OPUNC11G03220 N 0.000
OPUNC01G36980 Oryza punctata OPUNC01G36980 N 0.000
OPUNC12G03240 Oryza punctata OPUNC12G03240 N 0.000
OPUNC05G16010 Oryza punctata OPUNC05G16010 N 0.000
ORUFI01G41540 Oryza rufipogon ORUFI01G41540 N 0.000
ORUFI11G03420 Oryza rufipogon ORUFI11G03420 N 0.000
OS11G0154500 Oryza sativa OS11G0154500 N 0.000
OS01G0862800 Oryza sativa OS01G0862800 N 0.000
OS12G0156100 Oryza sativa OS12G0156100 N 0.000
Pavir.Ha01768 Panicum virgatum Pavir.Ha01768 N 0.000
Pavir.Ea03745 Panicum virgatum Pavir.Ea03745 N 0.000
Pavir.Hb01808 Panicum virgatum Pavir.Hb01808 N 0.000
Pavir.J02276 Panicum virgatum Pavir.J02276 N 0.000
Pavir.J04751 Panicum virgatum Pavir.J04751 N 0.000
Pavir.J13106 Panicum virgatum Pavir.J13106 N 0.000
Pavir.J36282 Panicum virgatum Pavir.J36282 N 0.000
POPTR_0001s22630 Populus trichocarpa POPTR_0001s22630 N 0.000
Pm001403 Prunus mume Pm001403 N 0.000
PRUPE_ppa010337mg Prunus persica PRUPE_ppa010337mg N 0.000
SapurV1A.0974s0010 Salix purpurea SapurV1A.0974s0010 N 0.000
Si026707m.g Setaria italica Si026707m.g N 0.000
Si002586m.g Setaria italica Si002586m.g N 0.000
Si022966m.g Setaria italica Si022966m.g N 0.000
Sb09g021780 Sorghum bicolor Sb09g021780 N 0.000
TCM_041364 Theobroma cacao TCM_041364 N 0.000
Traes_1AL_C76BCC7EC Triticum aestivum Traes_1AL_C76BCC7EC N 0.000
TRAES3BF019300010CFD_g Triticum aestivum TRAES3BF019300010CFD_g N 0.000
Traes_5DL_43FC1B296 Triticum aestivum Traes_5DL_43FC1B296 N 0.000
Traes_1AL_179FC28F2 Triticum aestivum Traes_1AL_179FC28F2 N 0.000
TRIUR3_33275 Triticum urartu TRIUR3_33275 N 0.000
TRIUR3_34272 Triticum urartu TRIUR3_34272 N 0.000
GRMZM2G465835 Zea mays GRMZM2G465835 N 0.000
GRMZM5G832473 Zea mays GRMZM5G832473 N 0.000