CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSBTAP00000010351-D1
(
Bos grunniens
)
STAT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02864 (STAT_bind)
IPR013801
ENSBTAP00000010351-D1
T337823_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
STAT1
M08171_2.00
Homo sapiens
HTTCCYRGAAV
BTTCYRGGAAD
ChIP-seq
Mathelier et al.(2014)
MA0137.3
0.987
0.987
STAT1
M08013_2.00
Homo sapiens
NBBNBTTCCHRGAADNSHNNN
NNNDSNHTTCYDGGAAVNVVN
ChIP-seq
Gerstein et al.(2012)
HeLa-S3_STAT1_Stanford
0.987
0.987
STAT1
M08014_2.00
Homo sapiens
YTTCCYRGAAR
YTTCYRGGAAR
ChIP-seq
Gerstein et al.(2012)
K562_STAT1_Stanford
0.987
0.987
STAT1
M08229_2.00
Homo sapiens
NTTCYNRGAA
TTCYNRGAAN
ChIP-seq
Contrino et al.(2012)
Mv124
0.987
0.987
STAT1
M08230_2.00
Homo sapiens
RGTTTCRBTT
AAVYGAAACY
ChIP-seq
Contrino et al.(2012)
Mv125
0.987
0.987
STAT1
M09411_2.00
Homo sapiens
HBHNYTTCCNRGAARHSHN
NDSDYTTCYNGGAARNDVD
Misc
Kulakovskiy et al.(2013)
STAT1_HUMAN.H11MO.0.A
0.987
0.987
STAT1
M09642_2.00
Homo sapiens
NHTTCYNRGAADNN
NNHTTCYNRGAADN
Misc
Heinz et al.(2010)
HelaS3-STAT1_GSE12782
0.987
0.987
STAT1
M11348_2.00
Homo sapiens
NSNYAHTTCCSGGAADBBNHV
BDNVVHTTCCSGGAADTRNSN
Transfac
Matys et al.(2006)
V$STAT1_01
0.987
0.987
STAT1
M11349_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$STAT1_02
0.987
0.987
STAT1
M11350_2.00
Homo sapiens
VNHTTMBN
NVKAADNB
Transfac
Matys et al.(2006)
V$STAT1_03
0.987
0.987
STAT1
M11351_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$STAT1_05
0.987
0.987
STAT1
M11352_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$STAT1_07
0.987
0.987
STAT1
M11353_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$STAT1_Q4
0.987
0.987
STAT1
M11354_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$STAT1_Q6
0.987
0.987
Stat1
M09422_2.00
Mus musculus
HNDBYNTNDBTTTCHNTTYYYY
RRRRAANDGAAAVHNANRVHND
Misc
Kulakovskiy et al.(2013)
STAT1_MOUSE.H11MO.0.A
0.954
0.954
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSBTAP00000010351-D1
STAT
317
566
FVVERQPCMPTHPQRPLVLKTGVQFTVKLRLLVKLQELNYNLKVKVLFDKDVNERNTVKGFRKFNILGTHTKVMNMEESTNGSLAAEFRHLQLKEQKNAGARTNEGPLIVTEELHSLSFETQLCQPGLVIDLETTSLPVVVISNVSQLPSGWASILWYNMLVAEPRNLSFFLNPPCARWSQLSEVLSWQFSSVTKRGLNVDQLNMLGEKLLGPNAGPDGLIPWTRFCKENINDKNFPFWLWIESILELIK
Links
Other
STAT
family TFs
Other
Bos grunniens
TFs
43 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F775_32974
Aegilops tauschii
F775_32974
N
0.000
BRADI4G03867
Brachypodium distachyon
BRADI4G03867
N
0.000
MLOC_21297
Hordeum vulgare
MLOC_21297
N
0.000
LPERR12G13750
Leersia perrieri
LPERR12G13750
N
0.000
OBART12G16530
Oryza barthii
OBART12G16530
N
0.000
ORGLA12G0207400
Oryza glaberrima
ORGLA12G0207400
N
0.000
ORGLA12G0145700
Oryza glaberrima
ORGLA12G0145700
N
0.000
OGLUM12G18120
Oryza glumaepatula
OGLUM12G18120
N
0.000
BGIOSGA037646
Oryza indica
BGIOSGA037646
N
0.000
OMERI12G11530
Oryza meridionalis
OMERI12G11530
N
0.000
ONIVA12G14900
Oryza nivara
ONIVA12G14900
N
0.000
OPUNC12G15050
Oryza punctata
OPUNC12G15050
N
0.000
ORUFI12G18360
Oryza rufipogon
ORUFI12G18360
N
0.000
OS12G0573200
Oryza sativa
OS12G0573200
N
0.000
Pavir.J08330
Panicum virgatum
Pavir.J08330
N
0.000
Pavir.J28748
Panicum virgatum
Pavir.J28748
N
0.000
Pavir.J38998
Panicum virgatum
Pavir.J38998
N
0.000
Sb08g018940
Sorghum bicolor
Sb08g018940
N
0.000
Traes_5BS_ED54C58C5
Triticum aestivum
Traes_5BS_ED54C58C5
N
0.000
Traes_5DS_C06FE6037
Triticum aestivum
Traes_5DS_C06FE6037
N
0.000
TRIUR3_22881
Triticum urartu
TRIUR3_22881
N
0.000
GRMZM2G179325
Zea mays
GRMZM2G179325
N
0.000
GRMZM2G159475
Zea mays
GRMZM2G159475
N
0.000