CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Sb08g018940
(
Sorghum bicolor
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
Sb08g018940
T201372_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Sb08g018940.1
GRAS
350
722
LRTLLVHCAQAVASDDRRSATELLRQIKQHASPQGDATQRLAHCFAEGLQARLAGTGSMVYQSLMAKRTSAADILQAYQLYMAAICFKKVVFVFSNHTIYNAALGKKKIHIVEYGIQYGFQWPCFLRWIADREGGPPEVRITGIDLPQPGFRPTQRIEETGRRLSKYAQQFGVPFKYQAIAASKMESIRAEDLNLDPEEVLIVNCLYQFKNLMDESVVIESPRDIVLNNIRKMRPHTFIHAIVNGSFSAPFFVTRFREALFFYSALFDALDATTPRDSNQRMLIEENLFGRAALNVIACEGTDRVERPETYKQWQVRNQRAGLKQQPLNPDVVQIVRNKVKDCYHKDFVIDVDHHWLLQGWKGRILYAISTWV
Links
Other
GRAS
family TFs
Other
Sorghum bicolor
TFs
34 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GRMZM2G159475
Zea mays
GRMZM2G159475
N
0.974
GRMZM2G179325
Zea mays
GRMZM2G179325
N
0.973
Pavir.J10950
Panicum virgatum
Pavir.J10950
N
0.889
Pavir.J28748
Panicum virgatum
Pavir.J28748
N
0.884
OMERI12G11530
Oryza meridionalis
OMERI12G11530
N
0.876
OPUNC12G15050
Oryza punctata
OPUNC12G15050
N
0.876
BGIOSGA037646
Oryza indica
BGIOSGA037646
N
0.871
OBART12G16530
Oryza barthii
OBART12G16530
N
0.871
ONIVA12G14900
Oryza nivara
ONIVA12G14900
N
0.871
ORGLA12G0145700
Oryza glaberrima
ORGLA12G0145700
N
0.871
ORGLA12G0207400
Oryza glaberrima
ORGLA12G0207400
N
0.871
OS12G0573200
Oryza sativa
OS12G0573200
N
0.871
OGLUM12G18120
Oryza glumaepatula
OGLUM12G18120
N
0.868
ORUFI12G18360
Oryza rufipogon
ORUFI12G18360
N
0.868
OB12G23410
Oryza brachyantha
OB12G23410
N
0.860
Traes_4DS_050789E2A
Triticum aestivum
Traes_4DS_050789E2A
N
0.850
BRADI4G03867
Brachypodium distachyon
BRADI4G03867
N
0.844
Traes_5BS_ED54C58C5
Triticum aestivum
Traes_5BS_ED54C58C5
N
0.819
F775_32974
Aegilops tauschii
F775_32974
N
0.817
MLOC_21297
Hordeum vulgare
MLOC_21297
N
0.817
Traes_5DS_C06FE6037
Triticum aestivum
Traes_5DS_C06FE6037
N
0.817
Traes_5DL_E275797CE
Triticum aestivum
Traes_5DL_E275797CE
N
0.789
Pavir.J38998
Panicum virgatum
Pavir.J38998
N
0.788
Pavir.J08330
Panicum virgatum
Pavir.J08330
N
0.786
TRAES3BF026400020CFD_g
Triticum aestivum
TRAES3BF026400020CFD_g
N
0.737
Traes_4AL_977AF4963
Triticum aestivum
Traes_4AL_977AF4963
N
0.712
OBART11G23670
Oryza barthii
OBART11G23670
N
0.705
ORUFI11G25550
Oryza rufipogon
ORUFI11G25550
N
0.705
ONIVA11G23190
Oryza nivara
ONIVA11G23190
N
0.704
BGIOSGA035741
Oryza indica
BGIOSGA035741
N
0.703
ORGLA11G0190200
Oryza glaberrima
ORGLA11G0190200
N
0.703
OS11G0705200
Oryza sativa
OS11G0705200
N
0.703
Pavir.Ha00317
Panicum virgatum
Pavir.Ha00317
N
0.703
ORGLA11G0190300
Oryza glaberrima
ORGLA11G0190300
N
0.701