Pavir.Ha00317 (Panicum virgatum)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 Pavir.Ha00317 T203001_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ha00317.1.p GRAS 428 801

Links

Other GRAS family TFs
Other Panicum virgatum TFs

45 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pavir.Hb00044 Panicum virgatum Pavir.Hb00044 N 0.930
Sb05g027740 Sorghum bicolor Sb05g027740 N 0.860
GRMZM5G868355 Zea mays GRMZM5G868355 N 0.856
Traes_4DS_050789E2A Triticum aestivum Traes_4DS_050789E2A N 0.850
Traes_5DL_E275797CE Triticum aestivum Traes_5DL_E275797CE N 0.842
GRMZM2G163427 Zea mays GRMZM2G163427 N 0.811
BRADI2G52227 Brachypodium distachyon BRADI2G52227 N 0.795
Si025985m.g Setaria italica Si025985m.g N 0.795
BRADI4G09197 Brachypodium distachyon BRADI4G09197 N 0.792
MLOC_74705 Hordeum vulgare MLOC_74705 N 0.781
ORGLA11G0190200 Oryza glaberrima ORGLA11G0190200 N 0.776
OS11G0705200 Oryza sativa OS11G0705200 N 0.776
BGIOSGA035741 Oryza indica BGIOSGA035741 N 0.773
ONIVA11G23190 Oryza nivara ONIVA11G23190 N 0.770
Traes_4BS_A79538646 Triticum aestivum Traes_4BS_A79538646 N 0.770
F775_17625 Aegilops tauschii F775_17625 N 0.768
OBART11G23670 Oryza barthii OBART11G23670 N 0.768
ORGLA11G0190300 Oryza glaberrima ORGLA11G0190300 N 0.768
ORUFI11G25550 Oryza rufipogon ORUFI11G25550 N 0.768
Traes_4DS_F8FC0C699 Triticum aestivum Traes_4DS_F8FC0C699 N 0.768
OB11G28090 Oryza brachyantha OB11G28090 N 0.762
Traes_4AL_FF199F127 Triticum aestivum Traes_4AL_FF199F127 N 0.757
LPERR11G20420 Leersia perrieri LPERR11G20420 N 0.746
TRIUR3_21532 Triticum urartu TRIUR3_21532 N 0.743
Traes_4DS_C7C37A73D Triticum aestivum Traes_4DS_C7C37A73D N 0.719
Traes_4BS_2EA81743E1 Triticum aestivum Traes_4BS_2EA81743E1 N 0.716
OPUNC12G15050 Oryza punctata OPUNC12G15050 N 0.714
BRADI4G09180 Brachypodium distachyon BRADI4G09180 N 0.711
OMERI12G11530 Oryza meridionalis OMERI12G11530 N 0.711
OBART11G23660 Oryza barthii OBART11G23660 N 0.709
F775_08285 Aegilops tauschii F775_08285 N 0.708
ORUFI12G18360 Oryza rufipogon ORUFI12G18360 N 0.708
Pavir.Ha00318 Panicum virgatum Pavir.Ha00318 N 0.705
BGIOSGA037646 Oryza indica BGIOSGA037646 N 0.704
OBART12G16530 Oryza barthii OBART12G16530 N 0.704
ONIVA12G14900 Oryza nivara ONIVA12G14900 N 0.704
ORGLA12G0145700 Oryza glaberrima ORGLA12G0145700 N 0.704
ORGLA12G0207400 Oryza glaberrima ORGLA12G0207400 N 0.704
OS12G0573200 Oryza sativa OS12G0573200 N 0.704
OGLUM12G18120 Oryza glumaepatula OGLUM12G18120 N 0.703
Sb08g018940 Sorghum bicolor Sb08g018940 N 0.703
BRADI4G09190 Brachypodium distachyon BRADI4G09190 N 0.700
F775_08284 Aegilops tauschii F775_08284 N 0.700
Traes_4DS_A5CD70F30 Triticum aestivum Traes_4DS_A5CD70F30 N 0.700
TRIUR3_21533 Triticum urartu TRIUR3_21533 N 0.700