Pavir.Hb00044 (Panicum virgatum)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 Pavir.Hb00044 T203013_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Hb00044.1.p GRAS 416 787

Links

Other GRAS family TFs
Other Panicum virgatum TFs

31 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pavir.Ha00317 Panicum virgatum Pavir.Ha00317 N 0.930
GRMZM5G868355 Zea mays GRMZM5G868355 N 0.859
Traes_4DS_050789E2A Triticum aestivum Traes_4DS_050789E2A N 0.850
Traes_5DL_E275797CE Triticum aestivum Traes_5DL_E275797CE N 0.842
Sb05g027740 Sorghum bicolor Sb05g027740 N 0.835
GRMZM2G163427 Zea mays GRMZM2G163427 N 0.800
Si025985m.g Setaria italica Si025985m.g N 0.795
BRADI2G52227 Brachypodium distachyon BRADI2G52227 N 0.789
TRAES3BF026400020CFD_g Triticum aestivum TRAES3BF026400020CFD_g N 0.789
BRADI4G09197 Brachypodium distachyon BRADI4G09197 N 0.781
MLOC_74705 Hordeum vulgare MLOC_74705 N 0.770
Traes_4BS_A79538646 Triticum aestivum Traes_4BS_A79538646 N 0.759
F775_17625 Aegilops tauschii F775_17625 N 0.757
Traes_4DS_F8FC0C699 Triticum aestivum Traes_4DS_F8FC0C699 N 0.757
TRIUR3_21532 Triticum urartu TRIUR3_21532 N 0.755
ORGLA11G0190200 Oryza glaberrima ORGLA11G0190200 N 0.754
OS11G0705200 Oryza sativa OS11G0705200 N 0.754
ORUFI11G25540 Oryza rufipogon ORUFI11G25540 N 0.752
BGIOSGA035741 Oryza indica BGIOSGA035741 N 0.751
OB11G28090 Oryza brachyantha OB11G28090 N 0.749
ONIVA11G23190 Oryza nivara ONIVA11G23190 N 0.749
OBART11G23670 Oryza barthii OBART11G23670 N 0.746
ORGLA11G0190300 Oryza glaberrima ORGLA11G0190300 N 0.746
ORUFI11G25550 Oryza rufipogon ORUFI11G25550 N 0.746
Traes_4AL_FF199F127 Triticum aestivum Traes_4AL_FF199F127 N 0.746
LPERR11G20420 Leersia perrieri LPERR11G20420 N 0.735
Traes_5AL_1A7387EDC Triticum aestivum Traes_5AL_1A7387EDC N 0.734
BGIOSGA035742 Oryza indica BGIOSGA035742 N 0.720
BRADI4G09180 Brachypodium distachyon BRADI4G09180 N 0.712
Pavir.J28748 Panicum virgatum Pavir.J28748 N 0.706
Traes_4DS_C7C37A73D Triticum aestivum Traes_4DS_C7C37A73D N 0.700