CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ORUFI11G25540
(
Oryza rufipogon
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
ORUFI11G25540
T201043_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ORUFI11G25540.1
GRAS
303
614
LHTLLIHCAQAVATSDRRSATELLKQIKQNSSARGDATQRLACCFAEGLEARLAGTGSQVYKSLVAKCTSTVDFLKAYKLFAAACCIKKVSFIFSNKTILDAVAGKRKLHIVDYGLSYGFQWPGLFKCLSEREGGPPEVRITGIDFPQPGFRPADQIEETGRRLSNCARQFGVPFRFQAIAAKWETVRREDLHLDREEEEEEEVLVVNCLHFLNALQDESVVVDSPSPRDMVLNNIRDMRPHVFVKCVVNGAYGAPFFLTRFRETLFFYSSQFDMLDATIPRDNDERLLIERDILGRCALNVIACEGAEGGG
Links
Other
GRAS
family TFs
Other
Oryza rufipogon
TFs
20 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA035742
Oryza indica
BGIOSGA035742
N
0.886
ONIVA11G23190
Oryza nivara
ONIVA11G23190
N
0.881
ORGLA11G0190300
Oryza glaberrima
ORGLA11G0190300
N
0.875
ORGLA11G0190200
Oryza glaberrima
ORGLA11G0190200
N
0.803
OS11G0705200
Oryza sativa
OS11G0705200
N
0.803
Traes_4DS_050789E2A
Triticum aestivum
Traes_4DS_050789E2A
N
0.800
BGIOSGA035741
Oryza indica
BGIOSGA035741
N
0.797
LPERR11G20420
Leersia perrieri
LPERR11G20420
N
0.792
Pavir.Hb00044
Panicum virgatum
Pavir.Hb00044
N
0.752
GRMZM5G868355
Zea mays
GRMZM5G868355
N
0.746
Traes_5DL_E275797CE
Triticum aestivum
Traes_5DL_E275797CE
N
0.737
Si025985m.g
Setaria italica
Si025985m.g
N
0.736
OBART11G23670
Oryza barthii
OBART11G23670
N
0.719
ORUFI11G25550
Oryza rufipogon
ORUFI11G25550
N
0.719
MLOC_74705
Hordeum vulgare
MLOC_74705
N
0.716
BRADI4G09197
Brachypodium distachyon
BRADI4G09197
N
0.713
TRAES3BF026400020CFD_g
Triticum aestivum
TRAES3BF026400020CFD_g
N
0.711
TRIUR3_21532
Triticum urartu
TRIUR3_21532
N
0.706
Traes_4AL_FF199F127
Triticum aestivum
Traes_4AL_FF199F127
N
0.703
OBART11G23660
Oryza barthii
OBART11G23660
N
0.700