CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OBART11G23660
(
Oryza barthii
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
OBART11G23660
T200675_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OBART11G23660.1
GRAS
97
437
KLLFSAADNMEMLNMAFLKGREEANKLCTSTVDFLKAYKLFAAACCIKKVSFIFSNKTILDAVAGKRKLHIVDYGLSYGFQWPGLFKCLSEREGGPPEVRITGIDFPQPGFRPADQIEETGRRLSNCARQFGVPFRFQAIAAKWETVRREDLHLDREEEEEEEEEVLVVNCLHFLNALQDESVVVDSPSPRDMVLNNIRDMRPHVFVQCVVNGAYGAPFFLTRFRETLFFYSSQFDMLDATIPRDNDERLLIERDILGRWALNVIACEGADRVDRPETYKQWLVRNHRAGLTQLPLQPQVVELVRDKVKKLYHKDFVIDVDHNWLLQGWKGRILYAMSTWV
Links
Other
GRAS
family TFs
Other
Oryza barthii
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ORGLA11G0190200
Oryza glaberrima
ORGLA11G0190200
N
0.924
OS11G0705200
Oryza sativa
OS11G0705200
N
0.924
BGIOSGA035741
Oryza indica
BGIOSGA035741
N
0.911
ONIVA11G23190
Oryza nivara
ONIVA11G23190
N
0.823
OBART11G23670
Oryza barthii
OBART11G23670
N
0.820
ORUFI11G25550
Oryza rufipogon
ORUFI11G25550
N
0.820
ORGLA11G0190300
Oryza glaberrima
ORGLA11G0190300
N
0.817
OB11G28090
Oryza brachyantha
OB11G28090
N
0.783
LPERR11G20420
Leersia perrieri
LPERR11G20420
N
0.737
BRADI2G52227
Brachypodium distachyon
BRADI2G52227
N
0.709
Pavir.Ha00317
Panicum virgatum
Pavir.Ha00317
N
0.709
ORUFI11G25540
Oryza rufipogon
ORUFI11G25540
N
0.700