CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OB12G23410
(
Oryza brachyantha
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
OB12G23410
T200629_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OB12G23410.1
GRAS
177
549
LRTLLIHCAQAVATDDRRSATELLKQIKQHAKPTGDATQRLAHCFAEGLQARLAGTGSLVHQSLMAKRTSAVDILQAYQLYMAAICFKKVSFMFSNHTIFNASLGKKKIHIVDYGIQYGFQWPCFLRRISQREGGPPEVTITGIDLPQPGFRPTERIEETGRRLSKYAQEFHVPFKYNAIAATKMESVRKEDLNIAPDEVLIVNCQYQFRTLMDESVVIDSPRDIVLSNIKKMQPHVFIHAIVNGSFSAPFFVTRFREALFYYSALFDILDATTPRESEQRLLIEQTIFGRAALNVIACEGTDRVERPETYKQWQVRNQRAGFKQLPLNPNIVQIVRDKVKDCYHKDFVIDIDHQWLLQGWKGRILYAIATWA
Links
Other
GRAS
family TFs
Other
Oryza brachyantha
TFs
23 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OPUNC12G15050
Oryza punctata
OPUNC12G15050
N
0.946
OMERI12G11530
Oryza meridionalis
OMERI12G11530
N
0.943
BGIOSGA037646
Oryza indica
BGIOSGA037646
N
0.938
OBART12G16530
Oryza barthii
OBART12G16530
N
0.938
ONIVA12G14900
Oryza nivara
ONIVA12G14900
N
0.938
ORGLA12G0145700
Oryza glaberrima
ORGLA12G0145700
N
0.938
ORGLA12G0207400
Oryza glaberrima
ORGLA12G0207400
N
0.938
OS12G0573200
Oryza sativa
OS12G0573200
N
0.938
OGLUM12G18120
Oryza glumaepatula
OGLUM12G18120
N
0.935
ORUFI12G18360
Oryza rufipogon
ORUFI12G18360
N
0.935
Sb08g018940
Sorghum bicolor
Sb08g018940
N
0.860
BRADI4G03867
Brachypodium distachyon
BRADI4G03867
N
0.857
GRMZM2G159475
Zea mays
GRMZM2G159475
N
0.854
Pavir.J28748
Panicum virgatum
Pavir.J28748
N
0.846
GRMZM2G179325
Zea mays
GRMZM2G179325
N
0.844
F775_32974
Aegilops tauschii
F775_32974
N
0.838
Traes_5DS_C06FE6037
Triticum aestivum
Traes_5DS_C06FE6037
N
0.838
Traes_5BS_ED54C58C5
Triticum aestivum
Traes_5BS_ED54C58C5
N
0.836
MLOC_21297
Hordeum vulgare
MLOC_21297
N
0.827
LPERR12G13750
Leersia perrieri
LPERR12G13750
N
0.755
Pavir.J38998
Panicum virgatum
Pavir.J38998
N
0.752
TRIUR3_22881
Triticum urartu
TRIUR3_22881
N
0.717
Pavir.J08330
Panicum virgatum
Pavir.J08330
N
0.712