CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

GJ11697 *(Drosophila virilis)* T-box
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00907 (T-box)	IPR001699	FBgn0198951	T340699_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
Doc3 M03990_2.00	Drosophila melanogaster	NRGGTGTBAD	HTVACACCYN	SELEX Nitta et al.(2015) Doc3_1	0.880	0.928
Doc3 M03991_2.00	Drosophila melanogaster	DAGGTGTBAN	NTVACACCTH	SELEX Nitta et al.(2015) Doc3_2	0.880	0.928
Doc2 M03992_2.00	Drosophila melanogaster	DRGGTGTBAN	NTVACACCYH	SELEX Nitta et al.(2015) Doc2_1	0.858	0.873
Doc2 M03993_2.00	Drosophila melanogaster	NAGGTGTBAN	NTVACACCTN	SELEX Nitta et al.(2015) Doc2_2	0.858	0.873
Doc2 M06454_2.00	Drosophila melanogaster	ARGYGTGAA	TTCACRCYT	B1H Zhu et al.(2011) Doc2_SANGER_5_FBgn0035956	0.858	0.873
TBX2 M02496_2.00	Takifugu rubripes	DAGGTGTBRN	NYVACACCTH	PBM Weirauch et al.(2014) pTH9289	0.736	0.597
TBX2 M02495_2.00	Gasterosteus aculeatus	NNVDCACNHN	NDNGTGHBNN	PBM Weirauch et al.(2014) pTH9182	0.736	0.591
For this family, TFs with SR scores > 0.734* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
FBpp0226114	T-box	61	241	AKLENNELWQQFHQIGTEMIITKSGRRMFPSMRVSLSGLEEEASYCVLLEMVPIGDCRYKFSGSQWVPAGGAEPQSPQRMYLHPDSPATGAHWQSQALLFNKVKLTNNTLDSNGHIVLASMHKYQPRLHIIRSSELTQLPWAPQQAFVFPETEFVAVTAYQNDRITKLKIDNNPFAKGFRE

Links
Other T-box family TFs
Other *Drosophila virilis* TFs