ACOM032190 (Anopheles coluzzii)
T-box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00907 (T-box) IPR001699 ACOM032190 T341373_2.00 Vectorbase (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
byn
M03984_2.00 		Drosophila melanogaster
ABGTGYGADDD
HHHTCRCACVT		 SELEX
Nitta et al.(2015)
byn_1 		0.876 0.866
byn
M03985_2.00 		Drosophila melanogaster
DNGTGYBAHWWDTVRCACNH
DNGTGYBAHWWDTVRCACNH		 SELEX
Nitta et al.(2015)
byn_2 		0.876 0.866
byn
M03986_2.00 		Drosophila melanogaster
RDGTGYGADNDNDNNNNNNDRDGTGYGADD
HHTCRCACHYHNNNNNNHNHNHTCRCACHY		 SELEX
Nitta et al.(2015)
byn_3 		0.876 0.866
byn
M03987_2.00 		Drosophila melanogaster
NNTMRCAYNWWNRTGYKAHN
NDTMRCAYNWWNRTGYKANN		 SELEX
Nitta et al.(2015)
byn_4 		0.876 0.866
byn
M06453_2.00 		Drosophila melanogaster
ADGTGCDA
THGCACHT		 B1H
Zhu et al.(2011)
byn_FlyReg_FBgn0011723 		0.876 0.866
T
M05809_2.00 		Homo sapiens
NANGTGYGAHWWNTVRCACCTN
NAGGTGYBANWWDTCRCACNTN		 SELEX
Yin et al.(2017)
T_eDBD_HT-SELEX_1 		0.804 0.710
T
M05810_2.00 		Homo sapiens
DTCRCAYVTABGTGYGAH
DTCRCACVTABRTGYGAH		 SELEX
Yin et al.(2017)
T_eDBD_HT-SELEX_2 		0.804 0.710
T
M09427_2.00 		Homo sapiens
BYNVCANNNVDGTGWKARDN
NHYTMWCACHBNNNTGBNRV		 Misc
Kulakovskiy et al.(2013)
BRAC_HUMAN.H11MO.0.A 		0.804 0.710
T
M09431_2.00 		Mus musculus
VVNRAWTTSACASNYHDVTGBNMAN
NTKNVCABHDRNSTGTSAAWTYNBB		 Misc
Kulakovskiy et al.(2013)
BRAC_MOUSE.H11MO.0.B 		0.804 0.710
T
M09651_2.00 		Mus musculus
NYTVDCASNNNNSTGHBARNN
NNYTVDCASNNNNSTGHBARN		 Misc
Heinz et al.(2010)
Mesoendoderm-Brachyury_GSE54963 		0.804 0.710
T
M11384_2.00 		Homo sapiens
MKHBTSACACSTAGGTGTGAAATK
MATTTCACACCTASGTGTSAVDMK		 Transfac
Matys et al.(2006)
V$BRACH_01 		0.804 0.710
T
M05811_2.00 		Homo sapiens
NABGTGYGAHWWNTVRCACSTN
NASGTGYBANWWDTCRCACVTN		 SELEX
Yin et al.(2017)
T_eDBD_Methyl-HT-SELEX_1 		0.804 0.710
T
M05812_2.00 		Homo sapiens
DTMRCAYVTABGTGYKAH
DTMRCACVTABRTGYKAH		 SELEX
Yin et al.(2017)
T_eDBD_Methyl-HT-SELEX_2 		0.804 0.710
TBX19
M03562_2.00 		Homo sapiens
NDTVRCACVTANGTGYKANN
NNTMRCACNTABGTGYBAHN		 SELEX
Jolma et al.(2013)
TBX19_1 		0.799 0.698
TBX19
M05803_2.00 		Homo sapiens
NAGGTGYBAHWDTMRCACNTN
NANGTGYKAHWDTVRCACCTN		 SELEX
Yin et al.(2017)
TBX19_eDBD_HT-SELEX 		0.799 0.698
TBX19
M05804_2.00 		Homo sapiens
NANGTGYKAHWDTVRCACSTN
NASGTGYBAHWDTMRCACNTN		 SELEX
Yin et al.(2017)
TBX19_eDBD_Methyl-HT-SELEX 		0.799 0.698
For this family, TFs with SR scores > 0.734 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ACOM032190-PA T-box 74 252

Links

Other T-box family TFs
Other Anopheles coluzzii TFs

162 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AALB001180 Anopheles albimanus AALB001180 N
AARA010780 Anopheles arabiensis AARA010780 I
AATE014886 Anopheles atroparvus AATE014886 I
ACHR006597 Anopheles christyi ACHR006597 N
ACOM039288 Anopheles coluzzii ACOM039288 I
ADIR011363 Anopheles dirus ADIR011363 I
AFAF002012 Anopheles farauti AFAF002012 I
AFUN008227 Anopheles funestus AFUN008227 I
AGAP008818 Anopheles gambiae AGAP008818 I
AMAM006507 Anopheles maculatus AMAM006507 N
AMEC005358 Anopheles melas AMEC005358 I
AMEM011238 Anopheles merus AMEM011238 I
AQUA004183 Anopheles quadriannulatus AQUA004183 N
ASIS007673 Anopheles sinensis ASIS007673 I
CpipJ_CPIJ009205 Culex pipiens CpipJ_CPIJ009205 N
CPIJ009205 Culex quinquefasciatus CPIJ009205 N
YQE_05417 Dendroctonus ponderosae YQE_05417 I
LLOJ000106 Lutzomyia longipalpis LLOJ000106 I
LLOJ000107 Lutzomyia longipalpis LLOJ000107 N
MESCA000012 Megaselia scalaris MESCA000012 I
PHUM404840 Pediculus humanus PHUM404840 I
PPAI001293 Phlebotomus papatasi PPAI001293 I
TC008672 Tribolium castaneum TC008672 I