MTR_3g066070 (Medicago truncatula)
TBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00352 (TBP) IPR000814 MTR_3g066070 T342722_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
KEH34629 TBP 57 137
KEH34629 TBP 145 228
KEH34630 TBP 57 134
KEH34630 TBP 142 225
KEH34631 TBP 57 134
KEH34631 TBP 142 225
KEH34632 TBP 57 119
KEH34632 TBP 128 211
KEH34633 TBP 57 119
KEH34633 TBP 128 211
KEH34634 TBP 57 119
KEH34634 TBP 128 211
KEH34635 TBP 7 70
KEH34635 TBP 79 162
KEH34636 TBP 34 117
KEH34637 TBP 57 119
KEH34637 TBP 128 161

Links

Other TBP family TFs
Other Medicago truncatula TFs

74 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00064p00125250 Amborella trichopoda AMTR_s00064p00125250 I 0.701
Aquca_037_00296 Aquilegia coerulea Aquca_037_00296 I 0.730
BRADI1G13220 Brachypodium distachyon BRADI1G13220 I 0.701
PK25605.1 Cannabis sativa PK25605.1 I 0.706
PK11932.1 Cannabis sativa PK11932.1 I 0.712
Ca_13293 Cicer arietinum Ca_13293 N 0.731
Ciclev10022324m.g Citrus clementina Ciclev10022324m.g I 0.704
orange1.1g029591m.g Citrus sinensis orange1.1g029591m.g I 0.711
Cucsa.142180 Cucumis sativus Cucsa.142180 I 0.701
Eucgr.K01483 Eucalyptus grandis Eucgr.K01483 I 0.707
Eucgr.J01752 Eucalyptus grandis Eucgr.J01752 I 0.707
GLYMA19G28780 Glycine max GLYMA19G28780 I 0.707
GLYMA18G44460 Glycine max GLYMA18G44460 I 0.701
GLYMA16G25450 Glycine max GLYMA16G25450 I 0.707
GLYMA09G41330 Glycine max GLYMA09G41330 I 0.711
GLYMA03G04500 Glycine max GLYMA03G04500 I 0.707
Gorai.013G202900 Gossypium raimondii Gorai.013G202900 I 0.701
Gorai.007G288000 Gossypium raimondii Gorai.007G288000 I 0.701
Gorai.004G244700 Gossypium raimondii Gorai.004G244700 I 0.715
MLOC_37365 Hordeum vulgare MLOC_37365 I 0.703
MLOC_44969 Hordeum vulgare MLOC_44969 I 0.701
LPERR12G14180 Leersia perrieri LPERR12G14180 I 0.707
Lus10002634.g Linum usitatissimum Lus10002634.g I 0.701
Lus10020260.g Linum usitatissimum Lus10020260.g I 0.701
chr1.LjT45A19.90.nd Lotus japonicus chr1.LjT45A19.90.nd N 0.736
LjT45I18.100.nd Lotus japonicus LjT45I18.100.nd I 0.707
cassava22625.valid.m1 Manihot esculenta cassava22625.valid.m1 I 0.701
cassava35684.valid.m1 Manihot esculenta cassava35684.valid.m1 I 0.701
MTR_7g072580 Medicago truncatula MTR_7g072580 I 0.707
MTR_3g065900 Medicago truncatula MTR_3g065900 N 0.918
GSMUA_Achr7G01480_001 Musa acuminata GSMUA_Achr7G01480_001 I 0.701
OBART12G16890 Oryza barthii OBART12G16890 I 0.707
OBART03G28150 Oryza barthii OBART03G28150 I 0.707
OB03G33310 Oryza brachyantha OB03G33310 I 0.713
OB03G33300 Oryza brachyantha OB03G33300 I 0.707
ORGLA03G0260300 Oryza glaberrima ORGLA03G0260300 I 0.707
ORGLA06G0285000 Oryza glaberrima ORGLA06G0285000 I 0.739
ORGLA12G0202200 Oryza glaberrima ORGLA12G0202200 I 0.707
OGLUM12G18540 Oryza glumaepatula OGLUM12G18540 I 0.707
OGLUM03G28780 Oryza glumaepatula OGLUM03G28780 I 0.707
BGIOSGA013244 Oryza indica BGIOSGA013244 I 0.721
BGIOSGA037671 Oryza indica BGIOSGA037671 I 0.701
OLONG_010453 Oryza longistaminata OLONG_010453 I 0.748
OMERI11G15350 Oryza meridionalis OMERI11G15350 I 0.707
OMERI03G24790 Oryza meridionalis OMERI03G24790 I 0.707
ONIVA12G15220 Oryza nivara ONIVA12G15220 I 0.721
ONIVA03G29180 Oryza nivara ONIVA03G29180 I 0.707
OPUNC12G15370 Oryza punctata OPUNC12G15370 I 0.707
OPUNC03G25660 Oryza punctata OPUNC03G25660 I 0.707
OPUNC01G04710 Oryza punctata OPUNC01G04710 I 0.720
ORUFI12G18750 Oryza rufipogon ORUFI12G18750 I 0.721
ORUFI03G29280 Oryza rufipogon ORUFI03G29280 I 0.721
TBP2 Oryza sativa OS03G0657000 I 0.707
OS12G0580300 Oryza sativa OS12G0580300 I 0.707
Pavir.J26398 Panicum virgatum Pavir.J26398 I 0.743
Pavir.Ib04166 Panicum virgatum Pavir.Ib04166 I 0.709
PDK_20s1715251g002 Phoenix dactylifera PDK_20s1715251g002 I 0.701
PDK_20s1328661g002 Phoenix dactylifera PDK_20s1328661g002 I 0.745
29950.m001154 Ricinus communis 29950.m001154 I 0.701
SapurV1A.0308s0180 Salix purpurea SapurV1A.0308s0180 I 0.705
SapurV1A.0680s0010 Salix purpurea SapurV1A.0680s0010 I 0.701
Si038805m.g Setaria italica Si038805m.g I 0.701
Si023295m.g Setaria italica Si023295m.g I 0.713
Sb08g022273 Sorghum bicolor Sb08g022273 I 0.715
Sb01g012880 Sorghum bicolor Sb01g012880 I 0.701
TCM_026453 Theobroma cacao TCM_026453 I 0.711
Traes_4AL_D48452758 Triticum aestivum Traes_4AL_D48452758 I 0.709
Traes_4BS_4F52653D8 Triticum aestivum Traes_4BS_4F52653D8 I 0.701
Traes_4DS_700213C0B Triticum aestivum Traes_4DS_700213C0B I 0.701
TRIUR3_13880 Triticum urartu TRIUR3_13880 I 0.711
VIT_06s0004g00180 Vitis vinifera VIT_06s0004g00180 I 0.707
GRMZM2G161418 Zea mays GRMZM2G161418 I 0.709
GRMZM2G149238 Zea mays GRMZM2G149238 I 0.701