PSEUBRA_SCAF4g05047 (Pseudozyma brasiliensis)
TBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00352 (TBP) IPR000814 PSEUBRA_SCAF4g05047 T342845_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SPT15
M01567_2.00 		Saccharomyces cerevisiae
NNDWDAW
WTHWHNN		 PBM
Zhu et al.(2009)
Spt15 		0.898 0.898
SPT15
M08609_2.00 		Saccharomyces cerevisiae
NNBBHWTATATATWNCNNDNB
VNHNNGNWATATATAWDVVNN		 Misc
DeBoer et al.(2011)
YER148W_798 		0.898 0.898
SPT15
M11393_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$TBP_Q6 		0.898 0.898
Tbp
M00216_2.00 		Mus musculus
NWWWWAW
WTWWWWN		 PBM
Badis et al.(2009)
Tbp_pr781 		0.790 0.790
TBP
M08231_2.00 		Homo sapiens
YATTTGCATD
HATGCAAATR		 ChIP-seq
Contrino et al.(2012)
Mv129 		0.790 0.790
TBP
M09432_2.00 		Homo sapiens
MTATAWAWRS
SYWTWTATAK		 Misc
Kulakovskiy et al.(2013)
TBP_HUMAN.H11MO.0.A 		0.790 0.790
Tbp
M09433_2.00 		Mus musculus
VTATAAAARS
SYTTTTATAB		 Misc
Kulakovskiy et al.(2013)
TBP_MOUSE.H11MO.0.A 		0.790 0.790
TBP
M11388_2.00 		Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB		 Transfac
Matys et al.(2006)
V$TATA_01 		0.790 0.790
TBP
M11389_2.00 		Homo sapiens
NCYWTAAAAD
HTTTTAWRGN		 Transfac
Matys et al.(2006)
V$TATA_C 		0.790 0.790
TBP
M11390_2.00 		Homo sapiens
KATAAATW
WATTTATM		 Transfac
Matys et al.(2006)
V$TBP_01 		0.790 0.790
TBP
M11391_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBP_Q6_01 		0.790 0.790
TBP
M11392_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBP_Q6 		0.790 0.790
TBP
M11491_2.00 		Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB		 Unknown
Mathelier et al.(2014)
MA0108.2 		0.790 0.790
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EST05893 TBP 65 147
EST05893 TBP 155 238

Links

Other TBP family TFs
Other Pseudozyma brasiliensis TFs

769 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ANCCAN_15122 Ancylostoma caninum ANCCAN_15122 I
ANCCEY_00087 Ancylostoma ceylanicum ANCCEY_00087 I
ACAC_0000427301 Angiostrongylus cantonensis ACAC_0000427301 I
ALUE_0001098001 Ascaris lumbricoides ALUE_0001098001 I
ASU_06106 Ascaris suum ASU_06106 I
Bm10487 Brugia malayi Bm10487 I
BTMF_0001757301 Brugia timori BTMF_0001757301 I
BXY_1612500 Bursaphelenchus xylophilus BXY_1612500 I
CBN30348 Caenorhabditis brenneri CBN30348 I
CBG08158 Caenorhabditis briggsae CBG08158 I
B0310.2 Caenorhabditis elegans WBGene00015138 D
CJA07808 Caenorhabditis japonica CJA07808 I
CRE17142 Caenorhabditis remanei CRE17142 I
DICVIV_10692 Dictyocaulus viviparus DICVIV_10692 I
HCOI00400800 Haemonchus contortus HCOI00400800 I
Hba_12492 Heterorhabditis bacteriophora Hba_12492 I
nLs.2.1.2.g09564 Litomosoides sigmodontis nLs.2.1.2.g09564 I
maker-nMf.1.1.scaf08525-snap-gene-0.5 Meloidogyne floridensis maker-nMf.1.1.scaf08525-snap-gene-0.5 I
MhA1_Contig575.frz3.gene2 Meloidogyne hapla MhA1_Contig575.frz3.gene2 I
Minc12888 Meloidogyne incognita Minc12888 I
NBR_0000708201 Nippostrongylus brasiliensis NBR_0000708201 I
OESDEN_02446 Oesophagostomum dentatum OESDEN_02446 I
nOo.2.0.1.g11672 Onchocerca ochengi nOo.2.0.1.g11672 I
WBGene00240779 Onchocerca volvulus WBGene00240779 I
PTRK_0000514200 Parastrongyloides trichosuri PTRK_0000514200 I
scaffold28-EXSNAP2012.45 Pristionchus exspectatus scaffold28-EXSNAP2012.45 I
RSKR_0000808100 Rhabditophanes kr3021 RSKR_0000808100 I
SBAD_0000510501 Soboliphyme baturini SBAD_0000510501 I
L596_g12501 Steinernema carpocapsae L596_g12501 I
L889_g30058 Steinernema feltiae L889_g30058 I
L893_g22395 Steinernema glaseri L893_g22395 I
L898_g26631 Steinernema monticolum L898_g26631 I
L892_g1322 Steinernema scapterisci L892_g1322 I
SPAL_0001464000 Strongyloides papillosus SPAL_0001464000 I
SSTP_0001056600 Strongyloides stercoralis SSTP_0001056600 I
SVE_0630300 Strongyloides venezuelensis SVE_0630300 I
SVUK_0001077701 Strongylus vulgaris SVUK_0001077701 I
TELCIR_01774 Teladorsagia circumcincta TELCIR_01774 I
D917_07770 Trichinella nativa D917_07770 I
EFV53318 Trichinella spiralis EFV53318 I
TMUE_s0016009100 Trichuris muris TMUE_s0016009100 I
TTRE_0000220801 Trichuris trichiura TTRE_0000220801 I
WUBG_01471 Wuchereria bancrofti WUBG_01471 I