TCP4 (Arabidopsis thaliana)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03634 (TCP) IPR005333 AT3G15030 T343687_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TCP4
M02501_2.00		 Arabidopsis thaliana
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH8084		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TCP4
M02514_2.00 		Arabidopsis lyrata
BKGGGACCAC
GTGGTCCCMV		 PBM
Weirauch et al.(2014)
pTH9313 		0.980 0.974
TCP3
M02500_2.00 		Arabidopsis thaliana
NDGGMCCACN
NGTGGKCCHN		 PBM
Weirauch et al.(2014)
pTH8835 		0.959 0.609
TCP3
M07274_2.00 		Arabidopsis thaliana
DHNGGGACCACH
DGTGGTCCCNDH		 Dap-seq
OMalley et al.(2016)
TCP3_colamp_a 		0.959 0.609
TCP3
M07275_2.00 		Arabidopsis thaliana
DNBGGGACCACHN
NDGTGGTCCCVNH		 Dap-seq
OMalley et al.(2016)
TCP3_col 		0.959 0.609
OS01G0213800
M11398_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PCF5_01 		0.943 0.548
LjT20A21.20.nc
M02519_2.00 		Lotus japonicus
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9202 		0.897 0.435
TCP2
M02503_2.00 		Arabidopsis thaliana
NBGGKMCCVN
NBGGKMCCVN		 PBM
Weirauch et al.(2014)
pTH8198 		0.888 0.452
TCP2
M02508_2.00 		Arabidopsis lyrata
GGSMCCAC
GTGGKSCC		 PBM
Weirauch et al.(2014)
pTH9231 		0.885 0.435
PK10344.1
M01313_2.00 		Cannabis sativa
GGGACCAC
GTGGTCCC		 PBM
Lambert et al.(2019)
pTH11464 		0.877 0.435
TCP5
M02510_2.00 		Arabidopsis lyrata
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9233 		0.865 0.391
TCP5
M02505_2.00 		Arabidopsis thaliana
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH7523 		0.852 0.383
TCP13
M07283_2.00 		Arabidopsis thaliana
GTGGGGACCACWD
HWGTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
PTF1_col_a 		0.851 0.417
TCP13
M07284_2.00 		Arabidopsis thaliana
NNBGGGACCACHN
NDGTGGTCCCVNN		 Dap-seq
OMalley et al.(2016)
PTF1_colamp_a 		0.851 0.417
For this family, TFs with SR scores > 0.822 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M02501_2.00 TCP 43 256

DNA Binding Domains

Protein ID Domain From To Sequence
AT3G15030.1 TCP 43 256
AT3G15030.2 TCP 43 256
AT3G15030.3 TCP 43 256
AT3G15030.4 TCP 43 256

Links

Other TCP family TFs
Other Arabidopsis thaliana TFs

420 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AGOS_AGL083W Ashbya gossypii AGOS_AGL083W I
CLUG_04669 Candida lusitaniae CLUG_04669 N
CLUG_04669 Clavispora lusitaniae CLUG_04669 N
Ecym_7239 Eremothecium cymbalariae Ecym_7239 I
KNAG_0A07100 Kazachstania naganishii KNAG_0A07100 I
KLLA0_F25630g Kluyveromyces lactis KLLA0_F25630g N
SAKL0A09856g Lachancea kluyveri SAKL0A09856g I
SU7_2014 Saccharomyces arboricola SU7_2014 I
666_YBR033W Saccharomyces bayanus 666_YBR033W N
14629_YKL038W Saccharomyces bayanus 14629_YKL038W I
RGT1 Saccharomyces cerevisiae YKL038W D
13522_YKL038W Saccharomyces mikatae 13522_YKL038W I
13626_YKL038W Saccharomyces paradoxus 13626_YKL038W I
AACERI_AaceriAGL083W Saccharomycetaceae sp ashbya aceri AACERI_AaceriAGL083W I
TPHA_0C04280 Tetrapisispora phaffii TPHA_0C04280 I
TDEL_0B06360 Torulaspora delbrueckii TDEL_0B06360 I
Kpol_1002p5 Vanderwaltozyma polyspora Kpol_1002p5 I
ZBAI_03469 Zygosaccharomyces bailii ZBAI_03469 I
ZYRO0E05676g Zygosaccharomyces rouxii ZYRO0E05676g I