PRUPE_ppa004661mg (Prunus persica)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03634 (TCP) IPR005333 PRUPE_ppa004661mg T344313_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TCP4
M02501_2.00 		Arabidopsis thaliana
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH8084 		0.945 0.439
TCP4
M02514_2.00 		Arabidopsis lyrata
BKGGGACCAC
GTGGTCCCMV		 PBM
Weirauch et al.(2014)
pTH9313 		0.945 0.439
TCP3
M02500_2.00 		Arabidopsis thaliana
NDGGMCCACN
NGTGGKCCHN		 PBM
Weirauch et al.(2014)
pTH8835 		0.942 0.426
TCP3
M07274_2.00 		Arabidopsis thaliana
DHNGGGACCACH
DGTGGTCCCNDH		 Dap-seq
OMalley et al.(2016)
TCP3_colamp_a 		0.942 0.426
TCP3
M07275_2.00 		Arabidopsis thaliana
DNBGGGACCACHN
NDGTGGTCCCVNH		 Dap-seq
OMalley et al.(2016)
TCP3_col 		0.942 0.426
OS01G0213800
M11398_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PCF5_01 		0.938 0.446
LjT20A21.20.nc
M02519_2.00 		Lotus japonicus
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9202 		0.884 0.338
TCP2
M02503_2.00 		Arabidopsis thaliana
NBGGKMCCVN
NBGGKMCCVN		 PBM
Weirauch et al.(2014)
pTH8198 		0.884 0.331
TCP2
M02508_2.00 		Arabidopsis lyrata
GGSMCCAC
GTGGKSCC		 PBM
Weirauch et al.(2014)
pTH9231 		0.879 0.331
PK10344.1
M01313_2.00 		Cannabis sativa
GGGACCAC
GTGGTCCC		 PBM
Lambert et al.(2019)
pTH11464 		0.851 0.311
TCP5
M02510_2.00 		Arabidopsis lyrata
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9233 		0.838 0.291
TCP13
M07283_2.00 		Arabidopsis thaliana
GTGGGGACCACWD
HWGTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
PTF1_col_a 		0.832 0.331
TCP13
M07284_2.00 		Arabidopsis thaliana
NNBGGGACCACHN
NDGTGGTCCCVNN		 Dap-seq
OMalley et al.(2016)
PTF1_colamp_a 		0.832 0.331
TCP5
M02505_2.00 		Arabidopsis thaliana
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH7523 		0.832 0.331
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EMJ13039 TCP 131 390

Links

Other TCP family TFs
Other Prunus persica TFs

396 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_002_00878 Aquilegia coerulea Aquca_002_00878 I 0.826
anac085 Arabidopsis lyrata Al_scaffold_0006_1351 I
anac044 Arabidopsis lyrata Al_scaffold_0003_51 N
PTF1 Arabidopsis lyrata fgenesh2_kg.3__146__AT3G02150.2 I 0.826
anac044 Arabidopsis thaliana AT3G01600 N
anac085 Arabidopsis thaliana AT5G14490 I
Bostr.2902s0186 Boechera stricta Bostr.2902s0186 I
Bostr.1460s0050 Boechera stricta Bostr.1460s0050 N
BRADI2G50687 Brachypodium distachyon BRADI2G50687 I 0.828
Bo3g055070 Brassica oleracea Bo3g055070 N
Bo3g055460 Brassica oleracea Bo3g055460 I 0.824
Bra001032 Brassica rapa Bra001032 I 0.824
Bra006257 Brassica rapa Bra006257 I
PK17141.1 Cannabis sativa PK17141.1 I
Cagra.3166s0054 Capsella grandiflora Cagra.3166s0054 I
Cagra.1561s0026 Capsella grandiflora Cagra.1561s0026 N
Carubv10014042m.g Capsella rubella Carubv10014042m.g I 0.827
Carubv10014004m.g Capsella rubella Carubv10014004m.g N
Carubv10002665m.g Capsella rubella Carubv10002665m.g I
evm.TU.supercontig_94.62 Carica papaya evm.TU.supercontig_94.62 I 0.827
Ca_23230 Cicer arietinum Ca_23230 N
Cla004701 Citrullus lanatus Cla004701 I
Ciclev10015507m.g Citrus clementina Ciclev10015507m.g I
Ciclev10020626m.g Citrus clementina Ciclev10020626m.g I 0.825
orange1.1g017725m.g Citrus sinensis orange1.1g017725m.g I 0.825
Cucsa.011210 Cucumis sativus Cucsa.011210 I
Eucgr.J02254 Eucalyptus grandis Eucgr.J02254 I
Thhalv10014467m.g Eutrema salsugineum Thhalv10014467m.g I 0.825
Thhalv10022099m.g Eutrema salsugineum Thhalv10022099m.g N
Thhalv10015728m.g Eutrema salsugineum Thhalv10015728m.g N
GLYMA16G07501 Glycine max GLYMA16G07501 N
GLYMA19G08510 Glycine max GLYMA19G08510 N
Gorai.007G075300 Gossypium raimondii Gorai.007G075300 I
Gorai.006G034600 Gossypium raimondii Gorai.006G034600 I
Lus10003668.g Linum usitatissimum Lus10003668.g N
MDP0000283975 Malus domestica MDP0000283975 N
MDP0000663564 Malus domestica MDP0000663564 I
MDP0000320363 Malus domestica MDP0000320363 I 0.829
MDP0000120671 Malus domestica MDP0000120671 I 0.822
cassava3690.m1 Manihot esculenta cassava3690.m1 I
cassava14633.m1 Manihot esculenta cassava14633.m1 I
MTR_7g033320 Medicago truncatula MTR_7g033320 I
mgf018486m Mimulus guttatus mgf018486m I
POPTR_0001s35490 Populus trichocarpa POPTR_0001s35490 I
Pm015625 Prunus mume Pm015625 I
PRUPE_ppa014630mg Prunus persica PRUPE_ppa014630mg I 0.823
PRUPE_ppa006948mg Prunus persica PRUPE_ppa006948mg I
30138.m003959 Ricinus communis 30138.m003959 I 0.825
29917.m002016 Ricinus communis 29917.m002016 I
SapurV1A.1388s0020 Salix purpurea SapurV1A.1388s0020 I
SapurV1A.0716s0010 Salix purpurea SapurV1A.0716s0010 I
Si002496m.g Setaria italica Si002496m.g I 0.825
PGSC0003DMG400026568 Solanum tuberosum PGSC0003DMG400026568 I 0.822
TCM_016984 Theobroma cacao TCM_016984 I
VIT_14s0066g00360 Vitis vinifera VIT_14s0066g00360 I