Cla018836 (Citrullus lanatus)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03634 (TCP) IPR005333 Cla018836 T344541_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TCP5
M02505_2.00 		Arabidopsis thaliana
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH7523 		0.919 0.480
TCP5
M02510_2.00 		Arabidopsis lyrata
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9233 		0.918 0.465
TCP17
M07290_2.00 		Arabidopsis thaliana
GTGGGGACCAC
GTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
TCP17_col_a 		0.896 0.409
TCP17
M07291_2.00 		Arabidopsis thaliana
RTGGGGACCAC
GTGGTCCCCAY		 Dap-seq
OMalley et al.(2016)
TCP17_colamp_a 		0.896 0.409
PK10344.1
M01313_2.00 		Cannabis sativa
GGGACCAC
GTGGTCCC		 PBM
Lambert et al.(2019)
pTH11464 		0.894 0.409
TCP13
M07283_2.00 		Arabidopsis thaliana
GTGGGGACCACWD
HWGTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
PTF1_col_a 		0.868 0.417
TCP13
M07284_2.00 		Arabidopsis thaliana
NNBGGGACCACHN
NDGTGGTCCCVNN		 Dap-seq
OMalley et al.(2016)
PTF1_colamp_a 		0.868 0.417
LjT20A21.20.nc
M02519_2.00 		Lotus japonicus
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9202 		0.857 0.370
OS01G0213800
M11398_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PCF5_01 		0.838 0.378
TCP3
M02500_2.00 		Arabidopsis thaliana
NDGGMCCACN
NGTGGKCCHN		 PBM
Weirauch et al.(2014)
pTH8835 		0.832 0.331
TCP3
M07274_2.00 		Arabidopsis thaliana
DHNGGGACCACH
DGTGGTCCCNDH		 Dap-seq
OMalley et al.(2016)
TCP3_colamp_a 		0.832 0.331
TCP3
M07275_2.00 		Arabidopsis thaliana
DNBGGGACCACHN
NDGTGGTCCCVNH		 Dap-seq
OMalley et al.(2016)
TCP3_col 		0.832 0.331
TCP4
M02501_2.00 		Arabidopsis thaliana
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH8084 		0.826 0.323
TCP4
M02514_2.00 		Arabidopsis lyrata
BKGGGACCAC
GTGGTCCCMV		 PBM
Weirauch et al.(2014)
pTH9313 		0.826 0.323
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cla018836 TCP 39 165

Links

Other TCP family TFs
Other Citrullus lanatus TFs

330 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AGABI2DRAFT_179892 Agaricus bisporus AGABI2DRAFT_179892 N
AGABI2DRAFT_192530 Agaricus bisporus AGABI2DRAFT_192530 N
AGABI2DRAFT_56847 Agaricus bisporus AGABI2DRAFT_56847 N
AB08896.1 Alternaria brassicicola AB08896.1 N
M378DRAFT_176509 Amanita muscaria M378DRAFT_176509 I
AGOS_ADL331C Ashbya gossypii AGOS_ADL331C I
COCC4DRAFT_125132 Bipolaris maydis COCC4DRAFT_125132 I
COCMIDRAFT_88977 Bipolaris oryzae COCMIDRAFT_88977 I
COCSADRAFT_159051 Bipolaris sorokiniana COCSADRAFT_159051 I
BOTBODRAFT_111636 Botryobasidium botryosum BOTBODRAFT_111636 I
BOTBODRAFT_114819 Botryobasidium botryosum BOTBODRAFT_114819 I
BOTBODRAFT_99971 Botryobasidium botryosum BOTBODRAFT_99971 N
Cflo_05874--XP_001121937.1_APIME Camponotus floridanus Cflo_05874--XP_001121937.1_APIME I
CERSUDRAFT_123639 Ceriporiopsis subvermispora CERSUDRAFT_123639 N
CC1G_00255 Coprinopsis cinerea CC1G_00255 I
CC1G_07392 Coprinopsis cinerea CC1G_07392 N
CC1G_07858 Coprinopsis cinerea CC1G_07858 N
CC1G_13679 Coprinopsis cinerea CC1G_13679 I
estExt_fgenesh1_pg.C_20723 Cryphonectria parasitica estExt_fgenesh1_pg.C_20723 I
DACRYDRAFT_31804 Dacryopinax sp DACRYDRAFT_31804 I
EPUS_01429 Endocarpon pusillum EPUS_01429 I
Ecym_3473 Eremothecium cymbalariae Ecym_3473 I
EV44_g3421 Erysiphe necator EV44_g3421 I
UCREL1_2263 Eutypa lata UCREL1_2263 I
UCREL1_2891 Eutypa lata UCREL1_2891 N
PV06_08316 Exophiala oligosperma PV06_08316 I
FIBRA_02642 Fibroporia radiculosa FIBRA_02642 I
FIBRA_04764 Fibroporia radiculosa FIBRA_04764 I
FIBRA_08570 Fibroporia radiculosa FIBRA_08570 I
FOMPIDRAFT_1081834 Fomitopsis pinicola FOMPIDRAFT_1081834 I
FOMPIDRAFT_1121239 Fomitopsis pinicola FOMPIDRAFT_1121239 N
FOMPIDRAFT_140591 Fomitopsis pinicola FOMPIDRAFT_140591 I
FGRRES_08890 Fusarium graminearum FGRRES_08890 N
FPSE_08224 Fusarium pseudograminearum FPSE_08224 N
GGTG_04596 Gaeumannomyces graminis GGTG_04596 I
GALMADRAFT_133211 Galerina marginata GALMADRAFT_133211 I
GALMADRAFT_227034 Galerina marginata GALMADRAFT_227034 N
GLOTRDRAFT_38143 Gloeophyllum trabeum GLOTRDRAFT_38143 I
GYMLUDRAFT_162520 Gymnopus luxurians GYMLUDRAFT_162520 I
M413DRAFT_24002 Hebeloma cylindrosporum M413DRAFT_24002 I
Genemark.3077_g Heterobasidion annosum Genemark.3077_g N
HETIRDRAFT_476671 Heterobasidion irregulare HETIRDRAFT_476671 N
JAAARDRAFT_117714 Jaapia argillacea JAAARDRAFT_117714 I
JAAARDRAFT_93592 Jaapia argillacea JAAARDRAFT_93592 I
K443DRAFT_1017 Laccaria amethystina K443DRAFT_1017 N
LACBIDRAFT_386478 Laccaria bicolor LACBIDRAFT_386478 N
LEMA_P114390.1 Leptosphaeria maculans LEMA_P114390.1 I
MGG_02979 Magnaporthe oryzae MGG_02979 N
MELLADRAFT_94219 Melampsora laricipopulina MELLADRAFT_94219 N
MAC_04576 Metarhizium acridum MAC_04576 I
MAM_03716 Metarhizium album MAM_03716 I
MANI_013732 Metarhizium anisopliae MANI_013732 I
MANI_028883 Metarhizium anisopliae MANI_028883 I
MBR_05977 Metarhizium brunneum MBR_05977 I
MGU_03716 Metarhizium guizhouense MGU_03716 N
MGU_06500 Metarhizium guizhouense MGU_06500 I
MAJ_03732 Metarhizium majus MAJ_03732 N
MAJ_04611 Metarhizium majus MAJ_04611 I
X797_003479 Metarhizium robertsii X797_003479 N
X797_005729 Metarhizium robertsii X797_005729 I
MVLG_00343 Microbotryum violaceum MVLG_00343 N
MVLG_04343 Microbotryum violaceum MVLG_04343 N
E5Q_02264 Mixia osmundae E5Q_02264 N
E5Q_05542 Mixia osmundae E5Q_05542 I
Moror_11417 Moniliophthora roreri Moror_11417 N
Moror_16653 Moniliophthora roreri Moror_16653 I
Moror_17490 Moniliophthora roreri Moror_17490 I
Moror_2098 Moniliophthora roreri Moror_2098 I
Moror_2734 Moniliophthora roreri Moror_2734 I
Moror_9029 Moniliophthora roreri Moror_9029 N
fgeneshMC_pg.3_#_1116 Mucor circinelloides fgeneshMC_pg.3_#_1116 I
fgeneshMC_pg.3_#_188 Mucor circinelloides fgeneshMC_pg.3_#_188 I
gw1.16.772.1 Mycosphaerella fijiensis gw1.16.772.1 N
NCAS_0A11120 Naumovozyma castellii NCAS_0A11120 I
NCU03481 Neurospora crassa NCU03481 I
NEUTE1DRAFT_123419 Neurospora tetrasperma NEUTE1DRAFT_123419 I
OCS_06644 Ophiocordyceps sinensis OCS_06644 N
PAXRUDRAFT_55546 Paxillus rubicundulus PAXRUDRAFT_55546 N
PAXRUDRAFT_95391 Paxillus rubicundulus PAXRUDRAFT_95391 I
PHACADRAFT_81332 Phanerochaete carnosa PHACADRAFT_81332 N
fgenesh1_pg.C_scaffold_15000082 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_15000082 N
fgeneshPB_pg.2__774 Phycomyces blakesleeanus fgeneshPB_pg.2__774 I
PILCRDRAFT_57544 Piloderma croceum PILCRDRAFT_57544 N
PIIN_01319 Piriformospora indica PIIN_01319 N
PISMIDRAFT_31667 Pisolithus microcarpus PISMIDRAFT_31667 I
PISMIDRAFT_39129 Pisolithus microcarpus PISMIDRAFT_39129 I
PISMIDRAFT_80640 Pisolithus microcarpus PISMIDRAFT_80640 N
M404DRAFT_551810 Pisolithus tinctorius M404DRAFT_551810 N
M404DRAFT_69579 Pisolithus tinctorius M404DRAFT_69579 I
PLEOSDRAFT_1104604 Pleurotus ostreatus PLEOSDRAFT_1104604 I
PredSwiss_ASS2010_4380.1 Pneumocystis carinii PredSwiss_ASS2010_4380.1 I
PredSwiss_CON587.2 Pneumocystis carinii PredSwiss_CON587.2 I
PredSwiss_EST856.1 Pneumocystis carinii PredSwiss_EST856.1 I
PNEG_02134 Pneumocystis murina PNEG_02134 I
POSPLDRAFT_104707 Postia placenta POSPLDRAFT_104707 I
POSPLDRAFT_42762 Postia placenta POSPLDRAFT_42762 I
POSPLDRAFT_43059 Postia placenta POSPLDRAFT_43059 I
MYCFIDRAFT_25002 Pseudocercospora fijiensis MYCFIDRAFT_25002 N
PAN0_018c5621 Pseudozyma antarctica PAN0_018c5621 N
PaG_02426 Pseudozyma aphidis PaG_02426 N
PaG_05617 Pseudozyma aphidis PaG_05617 N
PSEUBRA_SCAF20g03099 Pseudozyma brasiliensis PSEUBRA_SCAF20g03099 N
PHSY_001785 Pseudozyma hubeiensis PHSY_001785 N
PHSY_004115 Pseudozyma hubeiensis PHSY_004115 I
PGTG_16202 Puccinia graminis PGTG_16202 I
PTT_09966 Pyrenophora teres PTT_09966 N
PTRG_07337 Pyrenophora triticirepentis PTRG_07337 N
GLOINDRAFT_12270 Rhizophagus irregularis GLOINDRAFT_12270 I
GLOINDRAFT_29935 Rhizophagus irregularis GLOINDRAFT_29935 N
GLOINDRAFT_344442 Rhizophagus irregularis GLOINDRAFT_344442 N
GLOINDRAFT_44333 Rhizophagus irregularis GLOINDRAFT_44333 I
GLOINDRAFT_45684 Rhizophagus irregularis GLOINDRAFT_45684 I
GLOINDRAFT_49399 Rhizophagus irregularis GLOINDRAFT_49399 I
GLOINDRAFT_51431 Rhizophagus irregularis GLOINDRAFT_51431 I
GLOINDRAFT_58615 Rhizophagus irregularis GLOINDRAFT_58615 N
GLOINDRAFT_62801 Rhizophagus irregularis GLOINDRAFT_62801 N
GLOINDRAFT_75094 Rhizophagus irregularis GLOINDRAFT_75094 I
RO3G_10448 Rhizopus oryzae RO3G_10448 I
RHTO_01537 Rhodosporidium toruloides RHTO_01537 N
RHTO_05563 Rhodosporidium toruloides RHTO_05563 N
RTG_00382 Rhodotorula glutinis RTG_00382 N
Scas_Contig667.28 Saccharomyces castellii Scas_Contig667.28 I
AACERI_AaceriADL331C Saccharomycetaceae sp ashbya aceri AACERI_AaceriADL331C I
PTSG_02101 Salpingoeca rosetta PTSG_02101 I
SCHCODRAFT_104697 Schizophyllum commune SCHCODRAFT_104697 I
SCHCODRAFT_114988 Schizophyllum commune SCHCODRAFT_114988 I
SCHCODRAFT_255090 Schizophyllum commune SCHCODRAFT_255090 N
SPOG_03188 Schizosaccharomyces cryophilus SPOG_03188 I
SJAG_04009 Schizosaccharomyces japonicus SJAG_04009 I
SJAG_05153 Schizosaccharomyces japonicus SJAG_05153 I
SOCG_01448 Schizosaccharomyces octosporus SOCG_01448 I
SOCG_02523 Schizosaccharomyces octosporus SOCG_02523 I
ste11 Schizosaccharomyces pombe SPBC32C12.02 D
SCLCIDRAFT_6962 Scleroderma citrinum SCLCIDRAFT_6962 I
SBOR_9074 Sclerotinia borealis SBOR_9074 I
SS1G_04006 Sclerotinia sclerotiorum SS1G_04006 I
M408DRAFT_20648 Serendipita vermifera M408DRAFT_20648 N
SERLA73DRAFT_18452 Serpula lacrymans SERLA73DRAFT_18452 I
SERLA73DRAFT_71121 Serpula lacrymans SERLA73DRAFT_71121 I
SMAC_07212 Sordaria macrospora SMAC_07212 I
M422DRAFT_110441 Sphaerobolus stellatus M422DRAFT_110441 N
M422DRAFT_111122 Sphaerobolus stellatus M422DRAFT_111122 I
M422DRAFT_114792 Sphaerobolus stellatus M422DRAFT_114792 N
M422DRAFT_121750 Sphaerobolus stellatus M422DRAFT_121750 N
M422DRAFT_126587 Sphaerobolus stellatus M422DRAFT_126587 N
M422DRAFT_146751 Sphaerobolus stellatus M422DRAFT_146751 N
M422DRAFT_195883 Sphaerobolus stellatus M422DRAFT_195883 N
M422DRAFT_91926 Sphaerobolus stellatus M422DRAFT_91926 I
SPPG_07085 Spizellomyces punctatus SPPG_07085 I
sr16650 Sporisorium reilianum sr16650 N
fgenesh1_pg.C_scaffold_8000024 Sporobolomyces roseus fgenesh1_pg.C_scaffold_8000024 N
gw1.11.239.1 Sporobolomyces roseus gw1.11.239.1 N
CY34DRAFT_56447 Suillus luteus CY34DRAFT_56447 N
CY34DRAFT_797588 Suillus luteus CY34DRAFT_797588 I
BN946_scf184844.g19 Trametes cinnabarina BN946_scf184844.g19 N
BN946_scf184908.g134 Trametes cinnabarina BN946_scf184908.g134 I
BN946_scf184994.g55 Trametes cinnabarina BN946_scf184994.g55 I
BN946_scf184994.g60 Trametes cinnabarina BN946_scf184994.g60 N
TRIATDRAFT_28325 Trichoderma atroviride TRIATDRAFT_28325 I
TRIREDRAFT_34248 Trichoderma reesei TRIREDRAFT_34248 I
GSTUM_00001090001 Tuber melanosporum GSTUM_00001090001 I
M407DRAFT_219396 Tulasnella calospora M407DRAFT_219396 N
M407DRAFT_49125 Tulasnella calospora M407DRAFT_49125 I
UV8b_6489 Ustilaginoidea virens UV8b_6489 I
UHOR_02166 Ustilago hordei UHOR_02166 I
UHOR_08562 Ustilago hordei UHOR_08562 N
UM06025 Ustilago maydis UM06025 N
J056_002105 Wallemia ichthyophaga J056_002105 N
J056_002766 Wallemia ichthyophaga J056_002766 N