MDP0000287069 (Malus domestica)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03634 (TCP) IPR005333 MDP0000287069 T344938_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LjT20A21.20.nc
M02519_2.00 		Lotus japonicus
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9202 		0.937 0.603
TCP2
M02503_2.00 		Arabidopsis thaliana
NBGGKMCCVN
NBGGKMCCVN		 PBM
Weirauch et al.(2014)
pTH8198 		0.926 0.538
TCP2
M02508_2.00 		Arabidopsis lyrata
GGSMCCAC
GTGGKSCC		 PBM
Weirauch et al.(2014)
pTH9231 		0.926 0.538
TCP5
M02505_2.00 		Arabidopsis thaliana
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH7523 		0.888 0.359
TCP5
M02510_2.00 		Arabidopsis lyrata
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9233 		0.882 0.321
PK10344.1
M01313_2.00 		Cannabis sativa
GGGACCAC
GTGGTCCC		 PBM
Lambert et al.(2019)
pTH11464 		0.872 0.308
TCP13
M07283_2.00 		Arabidopsis thaliana
GTGGGGACCACWD
HWGTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
PTF1_col_a 		0.858 0.314
TCP13
M07284_2.00 		Arabidopsis thaliana
NNBGGGACCACHN
NDGTGGTCCCVNN		 Dap-seq
OMalley et al.(2016)
PTF1_colamp_a 		0.858 0.314
TCP3
M02500_2.00 		Arabidopsis thaliana
NDGGMCCACN
NGTGGKCCHN		 PBM
Weirauch et al.(2014)
pTH8835 		0.853 0.288
TCP3
M07274_2.00 		Arabidopsis thaliana
DHNGGGACCACH
DGTGGTCCCNDH		 Dap-seq
OMalley et al.(2016)
TCP3_colamp_a 		0.853 0.288
TCP3
M07275_2.00 		Arabidopsis thaliana
DNBGGGACCACHN
NDGTGGTCCCVNH		 Dap-seq
OMalley et al.(2016)
TCP3_col 		0.853 0.288
OS01G0213800
M11398_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PCF5_01 		0.853 0.314
TCP4
M02501_2.00 		Arabidopsis thaliana
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH8084 		0.845 0.269
TCP4
M02514_2.00 		Arabidopsis lyrata
BKGGGACCAC
GTGGTCCCMV		 PBM
Weirauch et al.(2014)
pTH9313 		0.845 0.269
TCP17
M07290_2.00 		Arabidopsis thaliana
GTGGGGACCAC
GTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
TCP17_col_a 		0.842 0.308
TCP17
M07291_2.00 		Arabidopsis thaliana
RTGGGGACCAC
GTGGTCCCCAY		 Dap-seq
OMalley et al.(2016)
TCP17_colamp_a 		0.842 0.308
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000287069 TCP 71 232

Links

Other TCP family TFs
Other Malus domestica TFs

416 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_14757 Aegilops tauschii F775_14757 N
BZIP44 Arabidopsis thaliana AT1G75390 D
BRADI3G22040 Brachypodium distachyon BRADI3G22040 N
BRADI4G27720 Brachypodium distachyon BRADI4G27720 N
Bra008192 Brassica rapa Bra008192 I
MLOC_71104 Hordeum vulgare MLOC_71104 N
LPERR08G10100 Leersia perrieri LPERR08G10100 N
LPERR09G03320 Leersia perrieri LPERR09G03320 N
OBART08G12060 Oryza barthii OBART08G12060 N
OBART09G04710 Oryza barthii OBART09G04710 N
OB08G20490 Oryza brachyantha OB08G20490 N
OB09G13080 Oryza brachyantha OB09G13080 N
ORGLA08G0106400 Oryza glaberrima ORGLA08G0106400 N
ORGLA03G0189000 Oryza glaberrima ORGLA03G0189000 N
OGLUM08G12880 Oryza glumaepatula OGLUM08G12880 N
OGLUM09G05500 Oryza glumaepatula OGLUM09G05500 N
BGIOSGA040512 Oryza indica BGIOSGA040512 N
BGIOSGA028522 Oryza indica BGIOSGA028522 N
OLONG_017657 Oryza longistaminata OLONG_017657 N
OLONG_022621 Oryza longistaminata OLONG_022621 N
OMERI08G10040 Oryza meridionalis OMERI08G10040 N
OMERI09G03860 Oryza meridionalis OMERI09G03860 N
ONIVA08G08480 Oryza nivara ONIVA08G08480 N
ONIVA08G12360 Oryza nivara ONIVA08G12360 N
OPUNC08G10970 Oryza punctata OPUNC08G10970 N
OPUNC09G04190 Oryza punctata OPUNC09G04190 N
ORUFI08G13590 Oryza rufipogon ORUFI08G13590 N
ORUFI09G05300 Oryza rufipogon ORUFI09G05300 N
OS09G0306400 Oryza sativa OS09G0306400 N
Pavir.Ba02250 Panicum virgatum Pavir.Ba02250 N
Pavir.Bb01636 Panicum virgatum Pavir.Bb01636 N
Si031353m.g Setaria italica Si031353m.g N
Sb02g020760 Sorghum bicolor Sb02g020760 N
Traes_5DL_67A38E9B7 Triticum aestivum Traes_5DL_67A38E9B7 N
TRIUR3_05083 Triticum urartu TRIUR3_05083 N
GRMZM2G092137 Zea mays GRMZM2G092137 N
AC203957.3_FG004 Zea mays AC203957.3_FG004 N