PDK_20s1312291g001 (Phoenix dactylifera)
TCR/CxC

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03638 (TCR) IPR005172 PDK_20s1312291g001 T346212_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT2G20110
M02520_2.00 		Arabidopsis thaliana
DTTTAAAH
DTTTAAAH		 PBM
Weirauch et al.(2014)
pTH7914 		0.672 0.440
TCX5
M02523_2.00 		Arabidopsis thaliana
NRTTCAAAYN
NRTTTGAAYN		 PBM
Weirauch et al.(2014)
pTH8164 		0.672 0.440
fgeneshCV_pg.C_scaffold_18000164
M02534_2.00 		Chlorella vulgaris
NNNNDYRAAH
DTTYRHNNNN		 PBM
Weirauch et al.(2014)
pTH9252 		0.672 0.440
AT2G20110
M07295_2.00 		Arabidopsis thaliana
WWHWAADATTYAAAW
WTTTRAATHTTWDWW		 Dap-seq
OMalley et al.(2016)
AT2G20110_col_a 		0.672 0.440
AT2G20110
M07296_2.00 		Arabidopsis thaliana
WWHNAAATTYAAAHN
NDTTTRAATTTNDWW		 Dap-seq
OMalley et al.(2016)
AT2G20110_colamp_a 		0.672 0.440
AT5G25790
M01319_2.00 		Arabidopsis thaliana
NHYRAAHN
NDTTYRDN		 PBM
Lambert et al.(2019)
pTH11533 		0.672 0.400
gw1.20.00.89.1
M02535_2.00 		Ostreococcus tauri
WNYWBVWRNW
WNYWBVWRNW		 PBM
Weirauch et al.(2014)
pTH9647 		0.672 0.352
XP_002124866.1
M01321_2.00 		Ciona intestinalis
NDTTYRAAN
NTTYRAAHN		 PBM
Lambert et al.(2019)
pTH9835 		0.672 0.333
lin54
M02526_2.00 		Danio rerio
NHTYRAAH
DTTYRADN		 PBM
Weirauch et al.(2014)
pTH8399 		0.672 0.320
NEMVEDRAFT_v1g111410
M01320_2.00 		Nematostella vectensis
NNNNYRWRN
NYWYRNNNN		 PBM
Lambert et al.(2019)
pTH9771 		0.672 0.320
TCX3
M01087_2.00 		Arabidopsis thaliana
NNDTTYAAAH
DTTTRAAHNN		 PBM
Sullivan et al.(2014)
pTH7218 		0.672 0.316
TCX3
M02522_2.00 		Arabidopsis thaliana
WTTYAAAH
DTTTRAAW		 PBM
Weirauch et al.(2014)
pTH7421 		0.672 0.316
TCX3
M07297_2.00 		Arabidopsis thaliana
DWTTYRAAWTTBAAW
WTTVAAATTYRAAWH		 Dap-seq
OMalley et al.(2016)
SOL1_colamp_a 		0.672 0.316
TCX3
M07298_2.00 		Arabidopsis thaliana
WTWWAAAATTYAAAW
WTTTRAATTTTWWAW		 Dap-seq
OMalley et al.(2016)
SOL1_col 		0.672 0.316
ENSTSYG00000005291
M02528_2.00 		Tarsius syrichta
NNWDHDHWNN
NNWDHDHWNN		 PBM
Weirauch et al.(2014)
pTH9366 		0.672 0.311
BGIBMGA008956
M02524_2.00 		Bombyx mori
AATTTAAAW
WTTTAAATT		 PBM
Weirauch et al.(2014)
pTH9238 		0.672 0.307
LIN54
M02527_2.00 		Gallus gallus
NRTTYAAAH
DTTTRAAYN		 PBM
Weirauch et al.(2014)
pTH8566 		0.672 0.307
SPU_025306
M02531_2.00 		Strongylocentrotus purpuratus
NNNNWYRAAH
DTTYRWNNNN		 PBM
Weirauch et al.(2014)
pTH9286 		0.672 0.307
fgenesh1_pg.C_Chr_09.0001000301
M02533_2.00 		Ostreococcus tauri
NNNNNRHNN
NNDYNNNNN		 PBM
Weirauch et al.(2014)
pTH9457 		0.672 0.307
TSO1
M07299_2.00 		Arabidopsis thaliana
WWWTWDAAATTYAAA
TTTRAATTTHWAWWW		 Dap-seq
OMalley et al.(2016)
TSO1_col_a 		0.672 0.307
TCX2
M07300_2.00 		Arabidopsis thaliana
WWTYVAAATTYRAAW
WTTYRAATTTBRAWW		 Dap-seq
OMalley et al.(2016)
TCX2_col_a 		0.672 0.303
TCX2
M07301_2.00 		Arabidopsis thaliana
TTYVAAATTYRAAW
WTTYRAATTTBRAA		 Dap-seq
OMalley et al.(2016)
TCX2_colamp_a 		0.672 0.303
PK27683.1
M01322_2.00 		Cannabis sativa
NDTTYAAAH
DTTTRAAHN		 PBM
Lambert et al.(2019)
pTH11347 		0.672 0.297
BRADI1G55710
M02525_2.00 		Brachypodium distachyon
NVTBYRVABN
NVTBYRVABN		 PBM
Weirauch et al.(2014)
pTH9241 		0.672 0.289
PK22848.1
M02532_2.00 		Cannabis sativa
NNNYNAAATTTNN
NNAAATTTNRNNN		 PBM
Weirauch et al.(2014)
pTH9724 		0.672 0.289
GE12548
M02529_2.00 		Drosophila yakuba
DTTYAAAY
RTTTRAAH		 PBM
Weirauch et al.(2014)
pTH9262 		0.672 0.280
GSPATT00010696001
M02530_2.00 		Paramecium tetraurelia
NNBRAAHN
NDTTYVNN		 PBM
Weirauch et al.(2014)
pTH8720 		0.672 0.280
TCX4
M02521_2.00 		Arabidopsis thaliana
DWTTYRAAWH
DWTTYRAAWH		 PBM
Weirauch et al.(2014)
pTH7573 		0.672 0.276
For this family, TFs with SR scores > 0.660 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PDK_20s1312291g001 TCR/CxC 264 300

Links

Other TCR/CxC family TFs
Other Phoenix dactylifera TFs

1213 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000008387 Ailuropoda melanoleuca ENSAMEG00000008387 I
ENSAMEG00000013125 Ailuropoda melanoleuca ENSAMEG00000013125 I
ENSAMEG00000016028 Ailuropoda melanoleuca ENSAMEG00000016028 I
Alligator_sinensis_CCG002074.1 Alligator sinensis Alligator_sinensis_CCG002074.1 I
Alligator_sinensis_CCG014136.1 Alligator sinensis Alligator_sinensis_CCG014136.1 I
ENSAPLG00000002580 Anas platyrhynchos ENSAPLG00000002580 I
ENSAPLG00000006003 Anas platyrhynchos ENSAPLG00000006003 I
HNF1B Anolis carolinensis ENSACAG00000006458 I
HMBOX1 Anolis carolinensis ENSACAG00000010160 I
Afo_R009049 Aptenodytes forsteri Afo_R009049 I
Afo_R011837 Aptenodytes forsteri Afo_R011837 I
Afo_R013605 Aptenodytes forsteri Afo_R013605 I
ENSAMXG00000004039 Astyanax mexicanus ENSAMXG00000004039 I
ENSAMXG00000005661 Astyanax mexicanus ENSAMXG00000005661 I
ENSAMXG00000011241 Astyanax mexicanus ENSAMXG00000011241 I
ENSAMXG00000018539 Astyanax mexicanus ENSAMXG00000018539 I
ENSAMXG00000024376 Astyanax mexicanus ENSAMXG00000024376 I
ENSBTAP00000006184-D1 Bos grunniens ENSBTAP00000006184-D1 I
ENSBTAP00000029049-D1 Bos grunniens ENSBTAP00000029049-D1 I
ENSP00000401769-D1 Bos grunniens ENSP00000401769-D1 I
HNF1B Bos taurus ENSBTAG00000004710 I
HMBOX1 Bos taurus ENSBTAG00000010819 I
HNF1A Bos taurus ENSBTAG00000021795 I
fgenesh2_kg.scaffold_157000001 Branchiostoma floridae fgenesh2_kg.scaffold_157000001 I
fgenesh2_kg.scaffold_214000001 Branchiostoma floridae fgenesh2_kg.scaffold_214000001 I
fgenesh2_pg.scaffold_505000025 Branchiostoma floridae fgenesh2_pg.scaffold_505000025 I
Brh_R011090 Buceros rhinoceros Brh_R011090 I
Brh_R012838 Buceros rhinoceros Brh_R012838 I
HNF1B Callithrix jacchus ENSCJAG00000015174 I
HMBOX1 Callithrix jacchus ENSCJAG00000015654 I
Aan_R008292 Calypte anna Aan_R008292 I
Aan_R010756 Calypte anna Aan_R010756 I
Aan_R014136 Calypte anna Aan_R014136 I
HMBOX1 Canis familiaris ENSCAFG00000008237 I
HNF1A Canis familiaris ENSCAFG00000010502 I
HNF1B Canis familiaris ENSCAFG00000018150 I
CapteG124171 Capitella teleta CapteG124171 I
HNF1B Cavia porcellus ENSCPOG00000001234 I
HNF1A Cavia porcellus ENSCPOG00000007242 I
HMBOX1 Cavia porcellus ENSCPOG00000011124 I
Cmyd_10005161 Chelonia mydas Cmyd_10005161 I
Cmyd_10005786 Chelonia mydas Cmyd_10005786 I
Cmyd_10016186 Chelonia mydas Cmyd_10016186 I
ENSCSAG00000002227 Chlorocebus sabaeus ENSCSAG00000002227 I
ENSCSAG00000006125 Chlorocebus sabaeus ENSCSAG00000006125 I
ENSCSAG00000015894 Chlorocebus sabaeus ENSCSAG00000015894 I
HMBOX1 Choloepus hoffmanni ENSCHOG00000005538 I
HNF1B Choloepus hoffmanni ENSCHOG00000006010 I
ENSCING00000003920 Ciona intestinalis ENSCING00000003920 I
ENSCING00000007645 Ciona intestinalis ENSCING00000007645 I
ENSCSAVG00000002486 Ciona savignyi ENSCSAVG00000002486 I
ENSCSAVG00000009827 Ciona savignyi ENSCSAVG00000009827 I
hnf1ba Danio rerio ENSDARG00000006615 I
hnf1a Danio rerio ENSDARG00000009470 I
hmbox1b Danio rerio ENSDARG00000018913 I
hnf1bb Danio rerio ENSDARG00000022295 I
hmbox1a Danio rerio ENSDARG00000027082 I
zgc:91944 Danio rerio ENSDARG00000035887 I
HNF1A Dasypus novemcinctus ENSDNOG00000000374 I
HNF1B Dasypus novemcinctus ENSDNOG00000001586 I
HMBOX1 Dasypus novemcinctus ENSDNOG00000031840 I
Hnf1a Dipodomys ordii ENSDORG00000007676 I
Hnf1b Dipodomys ordii ENSDORG00000009669 I
HMBOX1 Equus caballus ENSECAG00000008240 I
HNF1B Equus caballus ENSECAG00000015854 I
HNF1A Equus caballus ENSECAG00000019954 I
HNF1B Erinaceus europaeus ENSEEUG00000004998 I
HNF1B Felis catus ENSFCAG00000000241 I
HNF1A Felis catus ENSFCAG00000009638 I
HMBOX1 Felis catus ENSFCAG00000022672 I
ENSFALG00000005101 Ficedula albicollis ENSFALG00000005101 I
ENSFALG00000007499 Ficedula albicollis ENSFALG00000007499 I
ENSFALG00000010859 Ficedula albicollis ENSFALG00000010859 I
ENSGMOG00000001038 Gadus morhua ENSGMOG00000001038 I
ENSGMOG00000002742 Gadus morhua ENSGMOG00000002742 I
ENSGMOG00000004622 Gadus morhua ENSGMOG00000004622 I
ENSGMOG00000006872 Gadus morhua ENSGMOG00000006872 I
ENSGMOG00000016065 Gadus morhua ENSGMOG00000016065 I
HNF1B Gallus gallus ENSGALG00000005504 I
HNF1A Gallus gallus ENSGALG00000006968 I
HMBOX1 Gallus gallus ENSGALG00000016633 I
hmbox1b Gasterosteus aculeatus ENSGACG00000004391 I
zgc:91944 Gasterosteus aculeatus ENSGACG00000009223 I
hnf1ba Gasterosteus aculeatus ENSGACG00000011101 I
hnf1a Gasterosteus aculeatus ENSGACG00000012691 I
hmbox1a Gasterosteus aculeatus ENSGACG00000014814 I
Gfo_R008926 Geospiza fortis Gfo_R008926 I
Gfo_R010877 Geospiza fortis Gfo_R010877 I
Gfo_R012758 Geospiza fortis Gfo_R012758 I
HMBOX1 Gorilla gorilla ENSGGOG00000000860 I
HNF1A Gorilla gorilla ENSGGOG00000004329 I
HNF1B Gorilla gorilla ENSGGOG00000006322 I
HelroG166133 Helobdella robusta HelroG166133 I
HNF1A Homo sapiens ENSG00000135100 D
HMBOX1 Homo sapiens ENSG00000147421 D
HNF1B Homo sapiens ENSG00000275410 D
ENSSTOG00000004719 Ictidomys tridecemlineatus ENSSTOG00000004719 I
ENSSTOG00000012440 Ictidomys tridecemlineatus ENSSTOG00000012440 I
ENSLACG00000011304 Latimeria chalumnae ENSLACG00000011304 I
ENSLACG00000012983 Latimeria chalumnae ENSLACG00000012983 I
ENSLACG00000017915 Latimeria chalumnae ENSLACG00000017915 I
ENSLOCG00000001916 Lepisosteus oculatus ENSLOCG00000001916 I
ENSLOCG00000002874 Lepisosteus oculatus ENSLOCG00000002874 I
ENSLOCG00000005942 Lepisosteus oculatus ENSLOCG00000005942 I
ENSLOCG00000015994 Lepisosteus oculatus ENSLOCG00000015994 I
HNF1B Loxodonta africana ENSLAFG00000002573 I
HNF1A Loxodonta africana ENSLAFG00000017872 I
HMBOX1 Loxodonta africana ENSLAFG00000032318 I
ENSP00000225893 Macaca fascicularis ENSP00000225893 I
ENSP00000257555 Macaca fascicularis ENSP00000257555 I
ENSP00000401769 Macaca fascicularis ENSP00000401769 I
HNF1B Macaca mulatta ENSMMUG00000003431 I
HMBOX1 Macaca mulatta ENSMMUG00000014981 I
ENSMEUG00000004163 Macropus eugenii ENSMEUG00000004163 I
ENSMEUG00000015023 Macropus eugenii ENSMEUG00000015023 I
HNF1B Meleagris gallopavo ENSMGAG00000008126 I
HNF1A Meleagris gallopavo ENSMGAG00000008538 I
HNF1A Monodelphis domestica ENSMODG00000002966 I
HMBOX1 Monodelphis domestica ENSMODG00000008788 I
HNF1B Monodelphis domestica ENSMODG00000019108 I
ENSMPUG00000001070 Mustela putorius furo ENSMPUG00000001070 I
ENSMPUG00000003290 Mustela putorius furo ENSMPUG00000003290 I
ENSMPUG00000015004 Mustela putorius furo ENSMPUG00000015004 I
Hnf1b Mus musculus ENSMUSG00000020679 D
Hmbox1 Mus musculus ENSMUSG00000021972 D
Hnf1a Mus musculus ENSMUSG00000029556 D
Myotis_brandtii_HMBOX1_10012332 Myotis brandtii Myotis_brandtii_HMBOX1_10012332 I
Myotis_brandtii_HNF1A_10028127 Myotis brandtii Myotis_brandtii_HNF1A_10028127 I
Myotis_brandtii_HNF1B_10031016 Myotis brandtii Myotis_brandtii_HNF1B_10031016 I
HMBOX1 Myotis lucifugus ENSMLUG00000007478 I
HNF1A Myotis lucifugus ENSMLUG00000009109 I
HNF1B Myotis lucifugus ENSMLUG00000012260 I
ENSNLEG00000002919 Nomascus leucogenys ENSNLEG00000002919 I
ENSNLEG00000016701 Nomascus leucogenys ENSNLEG00000016701 I
HNF1A Ochotona princeps ENSOPRG00000001671 I
HNF1B Ochotona princeps ENSOPRG00000003933 I
SNAPOd2T00002150001 Oikopleura dioica SNAPOd2T00002150001 I
Ogr03456 Ophisaurus gracilis Ogr03456 I
ENSONIG00000001328 Oreochromis niloticus ENSONIG00000001328 I
ENSONIG00000003040 Oreochromis niloticus ENSONIG00000003040 I
ENSONIG00000007704 Oreochromis niloticus ENSONIG00000007704 I
ENSONIG00000011178 Oreochromis niloticus ENSONIG00000011178 I
ENSONIG00000013161 Oreochromis niloticus ENSONIG00000013161 I
HNF1A Ornithorhynchus anatinus ENSOANG00000014646 I
HNF1B Oryctolagus cuniculus ENSOCUG00000003682 I
HMBOX1 Oryctolagus cuniculus ENSOCUG00000017211 I
hnf1ba Oryzias latipes ENSORLG00000004564 I
hmbox1a Oryzias latipes ENSORLG00000014467 I
hmbox1b Oryzias latipes ENSORLG00000016242 I
ENSORLG00000018971 Oryzias latipes ENSORLG00000018971 I
zgc:91944 Oryzias latipes ENSORLG00000020883 I
HNF1B Otolemur garnettii ENSOGAG00000000869 I
HMBOX1 Otolemur garnettii ENSOGAG00000001381 I
HNF1A Otolemur garnettii ENSOGAG00000009071 I
ENSOARG00000003338 Ovis aries ENSOARG00000003338 I
ENSOARG00000013764 Ovis aries ENSOARG00000013764 I
ENSOARG00000015036 Ovis aries ENSOARG00000015036 I
HNF1A Pan troglodytes ENSPTRG00000005551 I
HNF1B Pan troglodytes ENSPTRG00000009059 I
HMBOX1 Pan troglodytes ENSPTRG00000020127 I
ENSPANG00000008728 Papio anubis ENSPANG00000008728 I
ENSPANG00000014537 Papio anubis ENSPANG00000014537 I
ENSPANG00000022102 Papio anubis ENSPANG00000022102 I
ENSPSIG00000009511 Pelodiscus sinensis ENSPSIG00000009511 I
ENSPSIG00000013055 Pelodiscus sinensis ENSPSIG00000013055 I
ENSPSIG00000016826 Pelodiscus sinensis ENSPSIG00000016826 I
ENSPFOG00000000843 Poecilia formosa ENSPFOG00000000843 I
ENSPFOG00000009496 Poecilia formosa ENSPFOG00000009496 I
ENSPFOG00000012263 Poecilia formosa ENSPFOG00000012263 I
ENSPFOG00000013053 Poecilia formosa ENSPFOG00000013053 I
ENSPFOG00000017886 Poecilia formosa ENSPFOG00000017886 I
Pvit_03697 Pogona vitticeps Pvit_03697 I
Pvit_13545 Pogona vitticeps Pvit_13545 I
ENSPPYG00000008222 Pongo abelii ENSPPYG00000008222 I
ENSPPYG00000018480 Pongo abelii ENSPPYG00000018480 I
HNF1B Procavia capensis ENSPCAG00000008147 I
HMBOX1 Procavia capensis ENSPCAG00000012005 I
HNF1A Pteropus vampyrus ENSPVAG00000008044 I
HNF1B Pteropus vampyrus ENSPVAG00000010466 I
Hnf1a Rattus norvegicus ENSRNOG00000001183 I
Hnf1b Rattus norvegicus ENSRNOG00000002598 I
Hmbox1 Rattus norvegicus ENSRNOG00000013326 I
Sakowv30011728m.g Saccoglossus kowalevskii Sakowv30011728m.g I
ENSSHAG00000005052 Sarcophilus harrisii ENSSHAG00000005052 I
ENSSHAG00000016211 Sarcophilus harrisii ENSSHAG00000016211 I
HNF1B Sorex araneus ENSSARG00000007152 I
SPU_002791 Strongylocentrotus purpuratus SPU_002791 I
SPU_010305 Strongylocentrotus purpuratus SPU_010305 I
SPU_022737 Strongylocentrotus purpuratus SPU_022737 I
HMBOX1 Sus scrofa ENSSSCG00000009682 I
HNF1A Sus scrofa ENSSSCG00000009919 I
HNF1B Sus scrofa ENSSSCG00000022417 I
HNF1A Taeniopygia guttata ENSTGUG00000009673 I
HMBOX1 Taeniopygia guttata ENSTGUG00000013324 I
hnf1ba Takifugu rubripes ENSTRUG00000003809 I
hmbox1b Takifugu rubripes ENSTRUG00000004378 I
hmbox1a Takifugu rubripes ENSTRUG00000006366 I
zgc:91944 Takifugu rubripes ENSTRUG00000012550 I
hnf1a Takifugu rubripes ENSTRUG00000016222 I
ENSTSYG00000001109 Tarsius syrichta ENSTSYG00000001109 I
ENSTSYG00000010701 Tarsius syrichta ENSTSYG00000010701 I
hnf1a Tetraodon nigroviridis ENSTNIG00000011468 I
hmbox1a Tetraodon nigroviridis ENSTNIG00000011904 I
zgc:91944 Tetraodon nigroviridis ENSTNIG00000014025 I
hnf1ba Tetraodon nigroviridis ENSTNIG00000016225 I
Q4S8E1_TETNG Tetraodon nigroviridis Q4S8E1_TETNG I
TriadG28952 Trichoplax adhaerens TriadG28952 I
HMBOX1 Tupaia belangeri ENSTBEG00000016300 I
HMBOX1 Tursiops truncatus ENSTTRG00000015467 I
HNF1B Tursiops truncatus ENSTTRG00000015910 I
Tal_R010417 Tyto alba Tal_R010417 I
hnf1b.S Xenopus laevis XB-GENE-17330995 I
hnf1b.L Xenopus laevis XB-GENE-485656 I
hmbox1.S Xenopus laevis XB-GENE-6078482 I
hnf1a.S Xenopus laevis XB-GENE-865049 I
hnf1a Xenopus tropicalis XB-GENE-484117 I
hnf1b Xenopus tropicalis XB-GENE-485652 I
XP_002939680 Xenopus tropicalis XP_002939680 I
ENSXMAG00000003472 Xiphophorus maculatus ENSXMAG00000003472 I
ENSXMAG00000005730 Xiphophorus maculatus ENSXMAG00000005730 I
ENSXMAG00000011675 Xiphophorus maculatus ENSXMAG00000011675 I
ENSXMAG00000011775 Xiphophorus maculatus ENSXMAG00000011775 I